Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ELL3Q9HB65 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ELL3Q9HB65 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
ELL3Q9HB65 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ELL3Q9HB65 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.83■□□□□ 0.28
ELL3Q9HB65 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.83■□□□□ 0.28
ELL3Q9HB65 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
ELL3Q9HB65 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ELL3Q9HB65 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ELL3Q9HB65 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ELL3Q9HB65 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ELL3Q9HB65 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ELL3Q9HB65 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.82■□□□□ 0.28
ELL3Q9HB65 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ELL3Q9HB65 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 NFIC-211ENST00000641145 8399 ntBASIC16.82■□□□□ 0.28
ELL3Q9HB65 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
ELL3Q9HB65 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
ELL3Q9HB65 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.82■□□□□ 0.28
ELL3Q9HB65 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.82■□□□□ 0.28
ELL3Q9HB65 AL032819.2-201ENST00000624543 2162 ntBASIC16.82■□□□□ 0.28
ELL3Q9HB65 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
ELL3Q9HB65 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ELL3Q9HB65 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.81■□□□□ 0.28
ELL3Q9HB65 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ELL3Q9HB65 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ELL3Q9HB65 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.81■□□□□ 0.28
ELL3Q9HB65 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ELL3Q9HB65 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.81■□□□□ 0.28
ELL3Q9HB65 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ELL3Q9HB65 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ELL3Q9HB65 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ELL3Q9HB65 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ELL3Q9HB65 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ELL3Q9HB65 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.81■□□□□ 0.28
ELL3Q9HB65 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.81■□□□□ 0.28
ELL3Q9HB65 DUSP5P2-201ENST00000426873 1033 ntBASIC16.81■□□□□ 0.28
ELL3Q9HB65 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.81■□□□□ 0.28
ELL3Q9HB65 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.81■□□□□ 0.28
ELL3Q9HB65 AC023632.3-201ENST00000521633 145 ntBASIC16.81■□□□□ 0.28
ELL3Q9HB65 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.81■□□□□ 0.28
ELL3Q9HB65 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.81■□□□□ 0.28
ELL3Q9HB65 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ELL3Q9HB65 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ELL3Q9HB65 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ELL3Q9HB65 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ELL3Q9HB65 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ELL3Q9HB65 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.81■□□□□ 0.28
ELL3Q9HB65 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ELL3Q9HB65 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ELL3Q9HB65 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ELL3Q9HB65 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ELL3Q9HB65 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ELL3Q9HB65 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ELL3Q9HB65 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.81■□□□□ 0.28
ELL3Q9HB65 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.81■□□□□ 0.28
ELL3Q9HB65 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ELL3Q9HB65 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ELL3Q9HB65 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ELL3Q9HB65 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 TNXA-203ENST00000507684 2038 ntBASIC16.8■□□□□ 0.28
ELL3Q9HB65 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ELL3Q9HB65 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ELL3Q9HB65 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ELL3Q9HB65 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
ELL3Q9HB65 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ELL3Q9HB65 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ELL3Q9HB65 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ELL3Q9HB65 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ELL3Q9HB65 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms