Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPTBN4Q9H254 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPTBN4Q9H254 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPTBN4Q9H254 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPTBN4Q9H254 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.46■□□□□ 0.55
SPTBN4Q9H254 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPTBN4Q9H254 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPTBN4Q9H254 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPTBN4Q9H254 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPTBN4Q9H254 IGHV3-47-201ENST00000425060 335 ntBASIC18.46■□□□□ 0.55
SPTBN4Q9H254 AP006288.1-201ENST00000446065 395 ntBASIC18.46■□□□□ 0.55
SPTBN4Q9H254 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SPTBN4Q9H254 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.46■□□□□ 0.55
SPTBN4Q9H254 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPTBN4Q9H254 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SPTBN4Q9H254 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPTBN4Q9H254 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.46■□□□□ 0.55
SPTBN4Q9H254 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.46■□□□□ 0.55
SPTBN4Q9H254 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SPTBN4Q9H254 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 AC036111.1-201ENST00000533973 1582 ntBASIC18.45■□□□□ 0.54
SPTBN4Q9H254 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 KRT8P17-201ENST00000453110 1448 ntBASIC18.45■□□□□ 0.54
SPTBN4Q9H254 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SPTBN4Q9H254 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.44■□□□□ 0.54
SPTBN4Q9H254 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.44■□□□□ 0.54
SPTBN4Q9H254 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.44■□□□□ 0.54
SPTBN4Q9H254 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPTBN4Q9H254 AL035252.4-201ENST00000624174 288 ntBASIC18.44■□□□□ 0.54
SPTBN4Q9H254 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPTBN4Q9H254 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPTBN4Q9H254 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
SPTBN4Q9H254 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPTBN4Q9H254 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.44■□□□□ 0.54
SPTBN4Q9H254 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SPTBN4Q9H254 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.44■□□□□ 0.54
SPTBN4Q9H254 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SPTBN4Q9H254 HNRNPDP1-201ENST00000439535 754 ntBASIC18.44■□□□□ 0.54
SPTBN4Q9H254 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPTBN4Q9H254 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.44■□□□□ 0.54
SPTBN4Q9H254 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPTBN4Q9H254 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 AC112482.1-201ENST00000492080 688 ntBASIC18.43■□□□□ 0.54
SPTBN4Q9H254 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.43■□□□□ 0.54
SPTBN4Q9H254 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.43■□□□□ 0.54
SPTBN4Q9H254 AL117328.2-201ENST00000624617 1940 ntBASIC18.43■□□□□ 0.54
SPTBN4Q9H254 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPTBN4Q9H254 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.42■□□□□ 0.54
SPTBN4Q9H254 AC012645.4-201ENST00000610691 1061 ntBASIC18.42■□□□□ 0.54
SPTBN4Q9H254 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
SPTBN4Q9H254 FAM197Y3-203ENST00000618346 717 ntBASIC18.42■□□□□ 0.54
SPTBN4Q9H254 Z83836.1-201ENST00000624605 1642 ntBASIC18.42■□□□□ 0.54
SPTBN4Q9H254 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.42■□□□□ 0.54
SPTBN4Q9H254 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.42■□□□□ 0.54
SPTBN4Q9H254 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.42■□□□□ 0.54
SPTBN4Q9H254 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPTBN4Q9H254 AC007274.1-201ENST00000439805 662 ntBASIC18.42■□□□□ 0.54
SPTBN4Q9H254 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.42■□□□□ 0.54
SPTBN4Q9H254 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.42■□□□□ 0.54
SPTBN4Q9H254 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPTBN4Q9H254 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms