Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM2Q9C040 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRIM2Q9C040 LINC01465-201ENST00000408887 1940 ntBASIC17.74■□□□□ 0.43
TRIM2Q9C040 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRIM2Q9C040 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM2Q9C040 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM2Q9C040 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRIM2Q9C040 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM2Q9C040 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM2Q9C040 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM2Q9C040 AC098818.2-201ENST00000564925 2320 ntBASIC17.74■□□□□ 0.43
TRIM2Q9C040 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.74■□□□□ 0.43
TRIM2Q9C040 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM2Q9C040 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM2Q9C040 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRIM2Q9C040 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM2Q9C040 UNC93B4-201ENST00000505679 747 ntBASIC17.74■□□□□ 0.43
TRIM2Q9C040 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM2Q9C040 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM2Q9C040 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM2Q9C040 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM2Q9C040 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM2Q9C040 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM2Q9C040 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM2Q9C040 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM2Q9C040 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM2Q9C040 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM2Q9C040 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRIM2Q9C040 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM2Q9C040 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM2Q9C040 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM2Q9C040 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM2Q9C040 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM2Q9C040 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM2Q9C040 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM2Q9C040 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM2Q9C040 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM2Q9C040 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM2Q9C040 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM2Q9C040 TUBB8P6-201ENST00000436895 1288 ntBASIC17.73■□□□□ 0.43
TRIM2Q9C040 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM2Q9C040 KRT18P16-201ENST00000510337 1294 ntBASIC17.73■□□□□ 0.43
TRIM2Q9C040 UNC93B5-201ENST00000530315 699 ntBASIC17.73■□□□□ 0.43
TRIM2Q9C040 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM2Q9C040 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRIM2Q9C040 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM2Q9C040 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM2Q9C040 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM2Q9C040 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM2Q9C040 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM2Q9C040 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM2Q9C040 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM2Q9C040 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM2Q9C040 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM2Q9C040 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM2Q9C040 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRIM2Q9C040 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM2Q9C040 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM2Q9C040 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRIM2Q9C040 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM2Q9C040 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRIM2Q9C040 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM2Q9C040 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM2Q9C040 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
TRIM2Q9C040 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM2Q9C040 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM2Q9C040 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM2Q9C040 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM2Q9C040 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM2Q9C040 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM2Q9C040 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM2Q9C040 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM2Q9C040 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM2Q9C040 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRIM2Q9C040 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRIM2Q9C040 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
TRIM2Q9C040 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM2Q9C040 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
TRIM2Q9C040 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM2Q9C040 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM2Q9C040 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM2Q9C040 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM2Q9C040 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRIM2Q9C040 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM2Q9C040 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM2Q9C040 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM2Q9C040 POM121L13P-201ENST00000422362 380 ntBASIC17.71■□□□□ 0.43
TRIM2Q9C040 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.71■□□□□ 0.43
TRIM2Q9C040 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TRIM2Q9C040 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TRIM2Q9C040 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM2Q9C040 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM2Q9C040 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM2Q9C040 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRIM2Q9C040 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM2Q9C040 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TRIM2Q9C040 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM2Q9C040 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM2Q9C040 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM2Q9C040 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms