Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 AC060766.5-201ENST00000590539 871 ntBASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
FOXP3Q9BZS1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
FOXP3Q9BZS1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
FOXP3Q9BZS1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 RPS2P4-201ENST00000476944 856 ntBASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXP3Q9BZS1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 AC006333.2-201ENST00000607957 2099 ntBASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 TEX21P-204ENST00000641479 1693 ntBASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 AL596275.1-201ENST00000423464 877 ntBASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 AC008403.3-201ENST00000598924 454 ntBASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
FOXP3Q9BZS1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 HLA-B-256ENST00000639848 1089 ntBASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 ZNF815P-204ENST00000434898 1737 ntBASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXP3Q9BZS1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXP3Q9BZS1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms