Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 LSM12P1-201ENST00000411836 588 ntBASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
THUMPD3Q9BV44 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 BX276092.2-201ENST00000417668 665 ntBASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 CROCCP3-202ENST00000420820 1947 ntBASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 AL049812.1-201ENST00000432563 2267 ntBASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
THUMPD3Q9BV44 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 NCF1B-203ENST00000435988 1254 ntBASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 AC116351.2-201ENST00000606540 1585 ntBASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
THUMPD3Q9BV44 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
THUMPD3Q9BV44 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms