Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SMOQ99835 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMOQ99835 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SMOQ99835 CYP2D8P-201ENST00000433633 1490 ntBASIC20.29■□□□□ 0.84
SMOQ99835 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMOQ99835 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.29■□□□□ 0.84
SMOQ99835 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMOQ99835 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMOQ99835 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.28■□□□□ 0.84
SMOQ99835 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.28■□□□□ 0.84
SMOQ99835 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMOQ99835 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMOQ99835 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMOQ99835 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SMOQ99835 CRYGFP-201ENST00000418459 633 ntBASIC20.28■□□□□ 0.84
SMOQ99835 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
SMOQ99835 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.28■□□□□ 0.84
SMOQ99835 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMOQ99835 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMOQ99835 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMOQ99835 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.28■□□□□ 0.84
SMOQ99835 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.28■□□□□ 0.84
SMOQ99835 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMOQ99835 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.27■□□□□ 0.84
SMOQ99835 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SMOQ99835 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.27■□□□□ 0.84
SMOQ99835 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMOQ99835 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMOQ99835 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.27■□□□□ 0.84
SMOQ99835 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMOQ99835 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.27■□□□□ 0.84
SMOQ99835 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.27■□□□□ 0.84
SMOQ99835 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMOQ99835 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.27■□□□□ 0.84
SMOQ99835 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMOQ99835 AC096733.2-201ENST00000609937 1394 ntBASIC20.27■□□□□ 0.84
SMOQ99835 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMOQ99835 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.27■□□□□ 0.84
SMOQ99835 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.27■□□□□ 0.84
SMOQ99835 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.27■□□□□ 0.84
SMOQ99835 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SMOQ99835 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.27■□□□□ 0.84
SMOQ99835 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.27■□□□□ 0.84
SMOQ99835 AC133561.5-201ENST00000635547 218 ntBASIC20.27■□□□□ 0.84
SMOQ99835 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMOQ99835 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMOQ99835 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
SMOQ99835 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
SMOQ99835 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
SMOQ99835 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMOQ99835 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.26■□□□□ 0.83
SMOQ99835 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMOQ99835 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SMOQ99835 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.26■□□□□ 0.83
SMOQ99835 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMOQ99835 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
SMOQ99835 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMOQ99835 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMOQ99835 ECEL1P3-201ENST00000427961 737 ntBASIC20.26■□□□□ 0.83
SMOQ99835 MFAP1P1-201ENST00000442257 1255 ntBASIC20.26■□□□□ 0.83
SMOQ99835 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.26■□□□□ 0.83
SMOQ99835 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.26■□□□□ 0.83
SMOQ99835 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.26■□□□□ 0.83
SMOQ99835 AC012306.2-201ENST00000609350 630 ntBASIC20.26■□□□□ 0.83
SMOQ99835 AC010947.1-201ENST00000623454 693 ntBASIC20.26■□□□□ 0.83
SMOQ99835 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMOQ99835 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMOQ99835 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMOQ99835 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SMOQ99835 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMOQ99835 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMOQ99835 KRT8P11-201ENST00000409686 1436 ntBASIC20.26■□□□□ 0.83
SMOQ99835 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.26■□□□□ 0.83
SMOQ99835 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMOQ99835 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.26■□□□□ 0.83
SMOQ99835 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMOQ99835 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMOQ99835 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMOQ99835 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.25■□□□□ 0.83
SMOQ99835 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMOQ99835 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.25■□□□□ 0.83
SMOQ99835 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.25■□□□□ 0.83
SMOQ99835 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMOQ99835 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMOQ99835 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.25■□□□□ 0.83
SMOQ99835 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMOQ99835 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMOQ99835 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMOQ99835 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMOQ99835 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMOQ99835 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMOQ99835 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMOQ99835 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMOQ99835 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMOQ99835 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMOQ99835 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMOQ99835 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.24■□□□□ 0.83
SMOQ99835 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.24■□□□□ 0.83
SMOQ99835 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMOQ99835 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms