Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.63■□□□□ 0.89
CASD1Q96PB1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.63■□□□□ 0.89
CASD1Q96PB1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASD1Q96PB1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CASD1Q96PB1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASD1Q96PB1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASD1Q96PB1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASD1Q96PB1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CASD1Q96PB1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.63■□□□□ 0.89
CASD1Q96PB1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASD1Q96PB1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CASD1Q96PB1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CASD1Q96PB1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASD1Q96PB1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CASD1Q96PB1 IER3-202ENST00000376377 1350 ntBASIC20.62■□□□□ 0.89
CASD1Q96PB1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CASD1Q96PB1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
CASD1Q96PB1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASD1Q96PB1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASD1Q96PB1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASD1Q96PB1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASD1Q96PB1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASD1Q96PB1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CASD1Q96PB1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CASD1Q96PB1 MIR4674-201ENST00000582457 87 ntBASIC20.62■□□□□ 0.89
CASD1Q96PB1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASD1Q96PB1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.62■□□□□ 0.89
CASD1Q96PB1 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.62■□□□□ 0.89
CASD1Q96PB1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.62■□□□□ 0.89
CASD1Q96PB1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.62■□□□□ 0.89
CASD1Q96PB1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASD1Q96PB1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASD1Q96PB1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CASD1Q96PB1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.61■□□□□ 0.89
CASD1Q96PB1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASD1Q96PB1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASD1Q96PB1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CASD1Q96PB1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASD1Q96PB1 AC005332.1-201ENST00000577698 1310 ntBASIC20.61■□□□□ 0.89
CASD1Q96PB1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASD1Q96PB1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.61■□□□□ 0.89
CASD1Q96PB1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.61■□□□□ 0.89
CASD1Q96PB1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASD1Q96PB1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.61■□□□□ 0.89
CASD1Q96PB1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.61■□□□□ 0.89
CASD1Q96PB1 NEK4P2-201ENST00000580004 1012 ntBASIC20.61■□□□□ 0.89
CASD1Q96PB1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.61■□□□□ 0.89
CASD1Q96PB1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.61■□□□□ 0.89
CASD1Q96PB1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASD1Q96PB1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASD1Q96PB1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CASD1Q96PB1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CASD1Q96PB1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CASD1Q96PB1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CASD1Q96PB1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CASD1Q96PB1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.6■□□□□ 0.89
CASD1Q96PB1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CASD1Q96PB1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CASD1Q96PB1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CASD1Q96PB1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CASD1Q96PB1 AP000523.1-201ENST00000398242 1049 ntBASIC20.6■□□□□ 0.89
CASD1Q96PB1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.6■□□□□ 0.89
CASD1Q96PB1 KRT18P56-201ENST00000507275 550 ntBASIC20.6■□□□□ 0.89
CASD1Q96PB1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.6■□□□□ 0.89
CASD1Q96PB1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CASD1Q96PB1 AC116407.4-201ENST00000623319 1061 ntBASIC20.6■□□□□ 0.89
CASD1Q96PB1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CASD1Q96PB1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.6■□□□□ 0.89
CASD1Q96PB1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CASD1Q96PB1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CASD1Q96PB1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.6■□□□□ 0.89
CASD1Q96PB1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CASD1Q96PB1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.6■□□□□ 0.89
CASD1Q96PB1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CASD1Q96PB1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
CASD1Q96PB1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CASD1Q96PB1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CASD1Q96PB1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CASD1Q96PB1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CASD1Q96PB1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CASD1Q96PB1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CASD1Q96PB1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
CASD1Q96PB1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CASD1Q96PB1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CASD1Q96PB1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CASD1Q96PB1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CASD1Q96PB1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.59■□□□□ 0.89
CASD1Q96PB1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.59■□□□□ 0.89
CASD1Q96PB1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.59■□□□□ 0.89
CASD1Q96PB1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CASD1Q96PB1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.59■□□□□ 0.89
CASD1Q96PB1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CASD1Q96PB1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CASD1Q96PB1 GCSHP2-201ENST00000560971 527 ntBASIC20.59■□□□□ 0.89
CASD1Q96PB1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
CASD1Q96PB1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
CASD1Q96PB1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CASD1Q96PB1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.59■□□□□ 0.89
CASD1Q96PB1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CASD1Q96PB1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms