Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF558Q96NG5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.53■□□□□ 0.88
ZNF558Q96NG5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
ZNF558Q96NG5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF558Q96NG5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.53■□□□□ 0.88
ZNF558Q96NG5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.53■□□□□ 0.88
ZNF558Q96NG5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.53■□□□□ 0.88
ZNF558Q96NG5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
ZNF558Q96NG5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.53■□□□□ 0.88
ZNF558Q96NG5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF558Q96NG5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF558Q96NG5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF558Q96NG5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ZNF558Q96NG5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.53■□□□□ 0.88
ZNF558Q96NG5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 AC116407.4-201ENST00000623319 1061 ntBASIC20.52■□□□□ 0.88
ZNF558Q96NG5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF558Q96NG5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF558Q96NG5 AP005212.1-201ENST00000581547 1997 ntBASIC20.52■□□□□ 0.87
ZNF558Q96NG5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.52■□□□□ 0.87
ZNF558Q96NG5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.52■□□□□ 0.87
ZNF558Q96NG5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
ZNF558Q96NG5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.87
ZNF558Q96NG5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 KRT18P48-201ENST00000434763 852 ntBASIC20.51■□□□□ 0.87
ZNF558Q96NG5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 VENTXP5-201ENST00000523979 775 ntBASIC20.51■□□□□ 0.87
ZNF558Q96NG5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 KRT126P-201ENST00000549467 1181 ntBASIC20.51■□□□□ 0.87
ZNF558Q96NG5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF558Q96NG5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF558Q96NG5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF558Q96NG5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF558Q96NG5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF558Q96NG5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF558Q96NG5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ZNF558Q96NG5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF558Q96NG5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.5■□□□□ 0.87
ZNF558Q96NG5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.5■□□□□ 0.87
ZNF558Q96NG5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ZNF558Q96NG5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.5■□□□□ 0.87
ZNF558Q96NG5 AC112907.2-201ENST00000448639 330 ntBASIC20.5■□□□□ 0.87
ZNF558Q96NG5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.5■□□□□ 0.87
ZNF558Q96NG5 AL136038.3-201ENST00000561909 1096 ntBASIC20.5■□□□□ 0.87
ZNF558Q96NG5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ZNF558Q96NG5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF558Q96NG5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF558Q96NG5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF558Q96NG5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF558Q96NG5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.49■□□□□ 0.87
ZNF558Q96NG5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.49■□□□□ 0.87
ZNF558Q96NG5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF558Q96NG5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.49■□□□□ 0.87
ZNF558Q96NG5 GCSHP2-201ENST00000560971 527 ntBASIC20.49■□□□□ 0.87
ZNF558Q96NG5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
ZNF558Q96NG5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF558Q96NG5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.49■□□□□ 0.87
ZNF558Q96NG5 AL162377.1-201ENST00000618844 1793 ntBASIC20.49■□□□□ 0.87
ZNF558Q96NG5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 STARP1-201ENST00000397973 869 ntBASIC20.48■□□□□ 0.87
ZNF558Q96NG5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.48■□□□□ 0.87
ZNF558Q96NG5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms