Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM5Q96HC4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 KRASP1-201ENST00000407852 552 ntBASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 AC239809.2-201ENST00000415381 517 ntBASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PDLIM5Q96HC4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 FEM1AP3-201ENST00000403722 1741 ntBASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 CD99P1-205ENST00000527459 561 ntBASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 AC110285.5-201ENST00000611501 352 ntBASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 AC073648.6-201ENST00000641589 218 ntBASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM5Q96HC4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 TSPY21P-201ENST00000433481 731 ntBASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 AC006058.3-201ENST00000606217 1069 ntBASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 IRX1P1-201ENST00000438849 1838 ntBASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM5Q96HC4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.84■□□□□ 0.61
PDLIM5Q96HC4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms