Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 AL512353.2-201ENST00000448759 1962 ntBASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMP6Q96FZ7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 SLC7A5P2-201ENST00000553010 536 ntBASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 AC243732.1-201ENST00000612648 864 ntBASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHMP6Q96FZ7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CHMP6Q96FZ7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CHMP6Q96FZ7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHMP6Q96FZ7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.39■□□□□ 0.7
CHMP6Q96FZ7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CHMP6Q96FZ7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 DUX4L2-201ENST00000561772 1275 ntBASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 DUX4L6-201ENST00000626483 1275 ntBASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 DUX4L1-201ENST00000627662 1275 ntBASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 DUX4L8-201ENST00000629013 1275 ntBASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 DUX4L3-201ENST00000630187 1275 ntBASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 DUX4L7-201ENST00000630678 1275 ntBASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 DUX4L5-201ENST00000630834 1275 ntBASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 MKRN4P-201ENST00000444706 1521 ntBASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms