Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.29■□□□□ 0.2
NEIL1Q96FI4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 TMEM179-206ENST00000616017 1645 ntBASIC16.29■□□□□ 0.2
NEIL1Q96FI4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEIL1Q96FI4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 NIFKP9-201ENST00000419265 221 ntBASIC16.28■□□□□ 0.2
NEIL1Q96FI4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 KSR1P1-201ENST00000446298 240 ntBASIC16.28■□□□□ 0.2
NEIL1Q96FI4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 MIR4785-201ENST00000585005 73 ntBASIC16.28■□□□□ 0.2
NEIL1Q96FI4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
NEIL1Q96FI4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NEIL1Q96FI4 CD177P1-201ENST00000606252 935 ntBASIC16.27■□□□□ 0.2
NEIL1Q96FI4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.27■□□□□ 0.19
NEIL1Q96FI4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.27■□□□□ 0.19
NEIL1Q96FI4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.27■□□□□ 0.19
NEIL1Q96FI4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NEIL1Q96FI4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.27■□□□□ 0.19
NEIL1Q96FI4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NEIL1Q96FI4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
NEIL1Q96FI4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
NEIL1Q96FI4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NEIL1Q96FI4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEIL1Q96FI4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.26■□□□□ 0.19
NEIL1Q96FI4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEIL1Q96FI4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NEIL1Q96FI4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
NEIL1Q96FI4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEIL1Q96FI4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEIL1Q96FI4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NEIL1Q96FI4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NEIL1Q96FI4 FAM197Y1-201ENST00000421178 764 ntBASIC16.26■□□□□ 0.19
NEIL1Q96FI4 TSPY7P-201ENST00000431358 1114 ntBASIC16.26■□□□□ 0.19
NEIL1Q96FI4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEIL1Q96FI4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEIL1Q96FI4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NEIL1Q96FI4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.26■□□□□ 0.19
NEIL1Q96FI4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.26■□□□□ 0.19
NEIL1Q96FI4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NEIL1Q96FI4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms