Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 AC091390.4-202ENST00000476426 537 ntBASIC19.19■□□□□ 0.66
SCAMP4Q969E2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 AP000525.1-201ENST00000608286 694 ntBASIC19.19■□□□□ 0.66
SCAMP4Q969E2 AC011298.2-201ENST00000617989 482 ntBASIC19.19■□□□□ 0.66
SCAMP4Q969E2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAMP4Q969E2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 AC004951.3-201ENST00000418645 1148 ntBASIC19.18■□□□□ 0.66
SCAMP4Q969E2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 KRT8P41-201ENST00000533985 1514 ntBASIC19.18■□□□□ 0.66
SCAMP4Q969E2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 Z82202.1-201ENST00000623446 1880 ntBASIC19.18■□□□□ 0.66
SCAMP4Q969E2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCAMP4Q969E2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP4Q969E2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SCAMP4Q969E2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.17■□□□□ 0.66
SCAMP4Q969E2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.17■□□□□ 0.66
SCAMP4Q969E2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.17■□□□□ 0.66
SCAMP4Q969E2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP4Q969E2 SLC25A24-204ENST00000569674 2357 ntBASIC19.17■□□□□ 0.66
SCAMP4Q969E2 UNC93B2-201ENST00000285383 730 ntBASIC19.17■□□□□ 0.66
SCAMP4Q969E2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP4Q969E2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.17■□□□□ 0.66
SCAMP4Q969E2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.17■□□□□ 0.66
SCAMP4Q969E2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP4Q969E2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP4Q969E2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP4Q969E2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP4Q969E2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
SCAMP4Q969E2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.17■□□□□ 0.66
SCAMP4Q969E2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCAMP4Q969E2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 AL390955.1-201ENST00000428694 934 ntBASIC19.16■□□□□ 0.66
SCAMP4Q969E2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCAMP4Q969E2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.15■□□□□ 0.66
SCAMP4Q969E2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP4Q969E2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP4Q969E2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP4Q969E2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCAMP4Q969E2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.15■□□□□ 0.66
SCAMP4Q969E2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.15■□□□□ 0.66
SCAMP4Q969E2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms