Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA4DQ92854 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.78■□□□□ 0.92
SEMA4DQ92854 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.78■□□□□ 0.92
SEMA4DQ92854 RARRES2P10-201ENST00000564312 460 ntBASIC20.78■□□□□ 0.92
SEMA4DQ92854 AF186192.3-201ENST00000583427 947 ntBASIC20.78■□□□□ 0.92
SEMA4DQ92854 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA4DQ92854 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA4DQ92854 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA4DQ92854 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.78■□□□□ 0.92
SEMA4DQ92854 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA4DQ92854 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA4DQ92854 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA4DQ92854 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SEMA4DQ92854 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA4DQ92854 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA4DQ92854 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.78■□□□□ 0.92
SEMA4DQ92854 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SEMA4DQ92854 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA4DQ92854 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SEMA4DQ92854 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.77■□□□□ 0.92
SEMA4DQ92854 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.77■□□□□ 0.92
SEMA4DQ92854 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA4DQ92854 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SEMA4DQ92854 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.77■□□□□ 0.92
SEMA4DQ92854 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA4DQ92854 AC141586.3-201ENST00000562166 1838 ntBASIC20.77■□□□□ 0.92
SEMA4DQ92854 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA4DQ92854 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.77■□□□□ 0.92
SEMA4DQ92854 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.77■□□□□ 0.92
SEMA4DQ92854 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.77■□□□□ 0.92
SEMA4DQ92854 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.77■□□□□ 0.92
SEMA4DQ92854 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA4DQ92854 AL353708.3-201ENST00000610272 989 ntBASIC20.77■□□□□ 0.92
SEMA4DQ92854 AL445675.2-201ENST00000620291 557 ntBASIC20.77■□□□□ 0.92
SEMA4DQ92854 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.77■□□□□ 0.92
SEMA4DQ92854 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA4DQ92854 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.77■□□□□ 0.92
SEMA4DQ92854 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SEMA4DQ92854 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SEMA4DQ92854 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SEMA4DQ92854 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA4DQ92854 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA4DQ92854 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA4DQ92854 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA4DQ92854 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA4DQ92854 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.76■□□□□ 0.91
SEMA4DQ92854 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
SEMA4DQ92854 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
SEMA4DQ92854 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA4DQ92854 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA4DQ92854 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA4DQ92854 Z85996.1-201ENST00000494644 937 ntBASIC20.76■□□□□ 0.91
SEMA4DQ92854 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.76■□□□□ 0.91
SEMA4DQ92854 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA4DQ92854 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.76■□□□□ 0.91
SEMA4DQ92854 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SEMA4DQ92854 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA4DQ92854 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEMA4DQ92854 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEMA4DQ92854 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEMA4DQ92854 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEMA4DQ92854 KRT8P41-201ENST00000533985 1514 ntBASIC20.75■□□□□ 0.91
SEMA4DQ92854 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SEMA4DQ92854 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEMA4DQ92854 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEMA4DQ92854 AC004980.1-204ENST00000429707 299 ntBASIC20.75■□□□□ 0.91
SEMA4DQ92854 AP002982.1-201ENST00000492365 877 ntBASIC20.75■□□□□ 0.91
SEMA4DQ92854 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.75■□□□□ 0.91
SEMA4DQ92854 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.75■□□□□ 0.91
SEMA4DQ92854 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
SEMA4DQ92854 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SEMA4DQ92854 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.75■□□□□ 0.91
SEMA4DQ92854 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SEMA4DQ92854 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.74■□□□□ 0.91
SEMA4DQ92854 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.74■□□□□ 0.91
SEMA4DQ92854 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
SEMA4DQ92854 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.74■□□□□ 0.91
SEMA4DQ92854 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.74■□□□□ 0.91
SEMA4DQ92854 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 UBE2SP1-201ENST00000450587 669 ntBASIC20.74■□□□□ 0.91
SEMA4DQ92854 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.74■□□□□ 0.91
SEMA4DQ92854 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.74■□□□□ 0.91
SEMA4DQ92854 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.74■□□□□ 0.91
SEMA4DQ92854 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.74■□□□□ 0.91
SEMA4DQ92854 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.74■□□□□ 0.91
SEMA4DQ92854 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms