Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF4Q92544 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.22■□□□□ 0.51
TM9SF4Q92544 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF4Q92544 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF4Q92544 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF4Q92544 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TM9SF4Q92544 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF4Q92544 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.21■□□□□ 0.51
TM9SF4Q92544 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.21■□□□□ 0.51
TM9SF4Q92544 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TM9SF4Q92544 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF4Q92544 PTBP1P-201ENST00000554374 1601 ntBASIC18.21■□□□□ 0.51
TM9SF4Q92544 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF4Q92544 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.21■□□□□ 0.51
TM9SF4Q92544 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF4Q92544 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF4Q92544 AP006587.1-201ENST00000534129 1502 ntBASIC18.21■□□□□ 0.51
TM9SF4Q92544 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF4Q92544 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF4Q92544 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TM9SF4Q92544 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF4Q92544 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.21■□□□□ 0.51
TM9SF4Q92544 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.21■□□□□ 0.51
TM9SF4Q92544 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF4Q92544 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.2■□□□□ 0.5
TM9SF4Q92544 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF4Q92544 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF4Q92544 LINC01568-207ENST00000641790 1380 ntBASIC18.2■□□□□ 0.5
TM9SF4Q92544 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF4Q92544 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF4Q92544 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF4Q92544 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TM9SF4Q92544 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.2■□□□□ 0.5
TM9SF4Q92544 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF4Q92544 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF4Q92544 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.2■□□□□ 0.5
TM9SF4Q92544 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.2■□□□□ 0.5
TM9SF4Q92544 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.2■□□□□ 0.5
TM9SF4Q92544 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.2■□□□□ 0.5
TM9SF4Q92544 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF4Q92544 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF4Q92544 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF4Q92544 KRT18P22-201ENST00000402024 1347 ntBASIC18.2■□□□□ 0.5
TM9SF4Q92544 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.2■□□□□ 0.5
TM9SF4Q92544 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF4Q92544 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF4Q92544 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.2■□□□□ 0.5
TM9SF4Q92544 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.2■□□□□ 0.5
TM9SF4Q92544 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF4Q92544 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.2■□□□□ 0.5
TM9SF4Q92544 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TM9SF4Q92544 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TM9SF4Q92544 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF4Q92544 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF4Q92544 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF4Q92544 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TM9SF4Q92544 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF4Q92544 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF4Q92544 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF4Q92544 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF4Q92544 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF4Q92544 AC116562.2-201ENST00000507042 360 ntBASIC18.19■□□□□ 0.5
TM9SF4Q92544 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.19■□□□□ 0.5
TM9SF4Q92544 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF4Q92544 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.19■□□□□ 0.5
TM9SF4Q92544 RN7SL850P-201ENST00000579959 291 ntBASIC18.19■□□□□ 0.5
TM9SF4Q92544 AL031985.4-201ENST00000642138 673 ntBASIC18.19■□□□□ 0.5
TM9SF4Q92544 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TM9SF4Q92544 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF4Q92544 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF4Q92544 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF4Q92544 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.19■□□□□ 0.5
TM9SF4Q92544 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF4Q92544 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF4Q92544 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF4Q92544 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.19■□□□□ 0.5
TM9SF4Q92544 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TM9SF4Q92544 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF4Q92544 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF4Q92544 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF4Q92544 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF4Q92544 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF4Q92544 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TM9SF4Q92544 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF4Q92544 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF4Q92544 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.18■□□□□ 0.5
TM9SF4Q92544 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TM9SF4Q92544 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
TM9SF4Q92544 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF4Q92544 KRT16P6-202ENST00000425692 1426 ntBASIC18.18■□□□□ 0.5
TM9SF4Q92544 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.18■□□□□ 0.5
TM9SF4Q92544 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF4Q92544 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TM9SF4Q92544 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.18■□□□□ 0.5
TM9SF4Q92544 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.18■□□□□ 0.5
TM9SF4Q92544 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.18■□□□□ 0.5
TM9SF4Q92544 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.18■□□□□ 0.5
TM9SF4Q92544 FITM1-202ENST00000559294 800 ntBASIC18.18■□□□□ 0.5
TM9SF4Q92544 AL049597.2-201ENST00000565575 961 ntBASIC18.18■□□□□ 0.5
TM9SF4Q92544 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms