Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTN4IP1Q8WWV3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 AC007613.1-201ENST00000572811 2597 ntBASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTN4IP1Q8WWV3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 AC091874.3-201ENST00000512672 1195 ntBASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 AC023632.3-201ENST00000521633 145 ntBASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 PHGDH-210ENST00000641115 1638 ntBASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
RTN4IP1Q8WWV3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 BCL2-203ENST00000589955 5011 ntBASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RTN4IP1Q8WWV3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms