Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.37■□□□□ 0.69
HMGB4Q8WW32 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
HMGB4Q8WW32 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HMGB4Q8WW32 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGB4Q8WW32 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGB4Q8WW32 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HMGB4Q8WW32 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGB4Q8WW32 KRT8P45-201ENST00000414328 1447 ntBASIC19.36■□□□□ 0.69
HMGB4Q8WW32 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HMGB4Q8WW32 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
HMGB4Q8WW32 AL671277.2-201ENST00000458060 996 ntBASIC19.36■□□□□ 0.69
HMGB4Q8WW32 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HMGB4Q8WW32 KRT18P56-201ENST00000507275 550 ntBASIC19.36■□□□□ 0.69
HMGB4Q8WW32 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HMGB4Q8WW32 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.36■□□□□ 0.69
HMGB4Q8WW32 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.36■□□□□ 0.69
HMGB4Q8WW32 AL121956.5-201ENST00000625261 221 ntBASIC19.36■□□□□ 0.69
HMGB4Q8WW32 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGB4Q8WW32 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGB4Q8WW32 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGB4Q8WW32 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HMGB4Q8WW32 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HMGB4Q8WW32 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 IER3-202ENST00000376377 1350 ntBASIC19.35■□□□□ 0.69
HMGB4Q8WW32 AC073314.1-201ENST00000568729 2216 ntBASIC19.35■□□□□ 0.69
HMGB4Q8WW32 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 FAM86EP-206ENST00000510506 987 ntBASIC19.35■□□□□ 0.69
HMGB4Q8WW32 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 AC093458.2-201ENST00000623150 629 ntBASIC19.35■□□□□ 0.69
HMGB4Q8WW32 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 AL691432.2-201ENST00000607222 2038 ntBASIC19.35■□□□□ 0.69
HMGB4Q8WW32 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGB4Q8WW32 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.34■□□□□ 0.69
HMGB4Q8WW32 AC009947.2-201ENST00000444014 672 ntBASIC19.34■□□□□ 0.69
HMGB4Q8WW32 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.34■□□□□ 0.69
HMGB4Q8WW32 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 AL391422.3-201ENST00000603791 2761 ntBASIC19.34■□□□□ 0.69
HMGB4Q8WW32 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.34■□□□□ 0.69
HMGB4Q8WW32 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGB4Q8WW32 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HMGB4Q8WW32 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.33■□□□□ 0.69
HMGB4Q8WW32 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HMGB4Q8WW32 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HMGB4Q8WW32 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGB4Q8WW32 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGB4Q8WW32 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms