Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 AC026185.1-201ENST00000445748 174 ntBASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RPS4Y2Q8TD47 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.89■□□□□ 0.3
RPS4Y2Q8TD47 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.89■□□□□ 0.3
RPS4Y2Q8TD47 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 AC007613.1-201ENST00000572811 2597 ntBASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.89■□□□□ 0.29
RPS4Y2Q8TD47 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 AC026471.1-201ENST00000564629 3026 ntBASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 CDCA4P2-201ENST00000441182 718 ntBASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 AC005829.2-201ENST00000571422 1056 ntBASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPS4Y2Q8TD47 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.87■□□□□ 0.29
RPS4Y2Q8TD47 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms