Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DNAAF1Q8NEP3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 KRT17P1-201ENST00000399211 1546 ntBASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 AC093787.1-201ENST00000450396 207 ntBASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DNAAF1Q8NEP3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
DNAAF1Q8NEP3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
DNAAF1Q8NEP3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
DNAAF1Q8NEP3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.96■□□□□ 0.3
DNAAF1Q8NEP3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.96■□□□□ 0.3
DNAAF1Q8NEP3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
DNAAF1Q8NEP3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
DNAAF1Q8NEP3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
DNAAF1Q8NEP3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
DNAAF1Q8NEP3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.96■□□□□ 0.3
DNAAF1Q8NEP3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 LSM12P1-201ENST00000411836 588 ntBASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
DNAAF1Q8NEP3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
DNAAF1Q8NEP3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
DNAAF1Q8NEP3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DNAAF1Q8NEP3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
DNAAF1Q8NEP3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.94■□□□□ 0.3
DNAAF1Q8NEP3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.94■□□□□ 0.3
DNAAF1Q8NEP3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
DNAAF1Q8NEP3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DNAAF1Q8NEP3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
DNAAF1Q8NEP3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
DNAAF1Q8NEP3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.94■□□□□ 0.3
DNAAF1Q8NEP3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
DNAAF1Q8NEP3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DNAAF1Q8NEP3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms