Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 MESTP1-201ENST00000404287 994 ntBASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 AL353807.1-201ENST00000427475 662 ntBASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 AL160286.2-201ENST00000567150 934 ntBASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 KRT8P41-201ENST00000533985 1514 ntBASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 KRT16P1-201ENST00000399124 1418 ntBASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.04■□□□□ 0.96
ZSWIM2Q8NEG5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 TEX21P-204ENST00000641479 1693 ntBASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 AC011506.1-201ENST00000474329 610 ntBASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 AL135905.2-201ENST00000584934 1404 ntBASIC21.03■□□□□ 0.96
ZSWIM2Q8NEG5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ZSWIM2Q8NEG5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.02■□□□□ 0.95
ZSWIM2Q8NEG5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ZSWIM2Q8NEG5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZSWIM2Q8NEG5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZSWIM2Q8NEG5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZSWIM2Q8NEG5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.01■□□□□ 0.95
ZSWIM2Q8NEG5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZSWIM2Q8NEG5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZSWIM2Q8NEG5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ZSWIM2Q8NEG5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.01■□□□□ 0.95
ZSWIM2Q8NEG5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZSWIM2Q8NEG5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.01■□□□□ 0.95
ZSWIM2Q8NEG5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
ZSWIM2Q8NEG5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.01■□□□□ 0.95
ZSWIM2Q8NEG5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.01■□□□□ 0.95
ZSWIM2Q8NEG5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZSWIM2Q8NEG5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms