Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
C3orf56Q8N813 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.1■□□□□ 0.01
C3orf56Q8N813 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C3orf56Q8N813 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C3orf56Q8N813 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
C3orf56Q8N813 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C3orf56Q8N813 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C3orf56Q8N813 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C3orf56Q8N813 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
C3orf56Q8N813 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C3orf56Q8N813 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C3orf56Q8N813 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.09■□□□□ 0.01
C3orf56Q8N813 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C3orf56Q8N813 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C3orf56Q8N813 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
C3orf56Q8N813 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C3orf56Q8N813 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C3orf56Q8N813 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C3orf56Q8N813 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
C3orf56Q8N813 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.09■□□□□ 0.01
C3orf56Q8N813 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.09■□□□□ 0.01
C3orf56Q8N813 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.09■□□□□ 0.01
C3orf56Q8N813 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.09■□□□□ 0.01
C3orf56Q8N813 NEK4P2-201ENST00000580004 1012 ntBASIC15.09■□□□□ 0.01
C3orf56Q8N813 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.09■□□□□ 0.01
C3orf56Q8N813 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.09■□□□□ 0.01
C3orf56Q8N813 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C3orf56Q8N813 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.09■□□□□ 0.01
C3orf56Q8N813 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
C3orf56Q8N813 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C3orf56Q8N813 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
C3orf56Q8N813 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
C3orf56Q8N813 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C3orf56Q8N813 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C3orf56Q8N813 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C3orf56Q8N813 AL022342.1-201ENST00000400363 863 ntBASIC15.08■□□□□ 0
C3orf56Q8N813 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.08■□□□□ 0
C3orf56Q8N813 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
C3orf56Q8N813 Z85996.1-201ENST00000494644 937 ntBASIC15.08■□□□□ 0
C3orf56Q8N813 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.08■□□□□ 0
C3orf56Q8N813 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.08■□□□□ 0
C3orf56Q8N813 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.08■□□□□ 0
C3orf56Q8N813 LINC01711-201ENST00000598340 967 ntBASIC15.08■□□□□ 0
C3orf56Q8N813 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C3orf56Q8N813 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
C3orf56Q8N813 NPAP1P7-201ENST00000613027 823 ntBASIC15.08■□□□□ 0
C3orf56Q8N813 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
C3orf56Q8N813 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C3orf56Q8N813 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
C3orf56Q8N813 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
C3orf56Q8N813 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C3orf56Q8N813 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
C3orf56Q8N813 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.08■□□□□ 0
C3orf56Q8N813 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.08■□□□□ 0
C3orf56Q8N813 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.08■□□□□ 0
C3orf56Q8N813 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C3orf56Q8N813 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.07■□□□□ 0
C3orf56Q8N813 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C3orf56Q8N813 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C3orf56Q8N813 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.07■□□□□ 0
C3orf56Q8N813 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C3orf56Q8N813 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C3orf56Q8N813 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.07■□□□□ 0
C3orf56Q8N813 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.07■□□□□ 0
C3orf56Q8N813 BX276092.5-203ENST00000456199 560 ntBASIC15.07■□□□□ 0
C3orf56Q8N813 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.07■□□□□ 0
C3orf56Q8N813 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.07■□□□□ 0
C3orf56Q8N813 GCSHP2-201ENST00000560971 527 ntBASIC15.07■□□□□ 0
C3orf56Q8N813 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.07■□□□□ 0
C3orf56Q8N813 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.07■□□□□ 0
C3orf56Q8N813 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.07■□□□□ 0
C3orf56Q8N813 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C3orf56Q8N813 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC15.07■□□□□ 0
C3orf56Q8N813 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
C3orf56Q8N813 PHGDH-210ENST00000641115 1638 ntBASIC15.06■□□□□ 0
C3orf56Q8N813 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
C3orf56Q8N813 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.06■□□□□ 0
C3orf56Q8N813 MYB-221ENST00000527615 2381 ntTSL 5 BASIC15.06■□□□□ 0
C3orf56Q8N813 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C3orf56Q8N813 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
C3orf56Q8N813 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.06■□□□□ 0
C3orf56Q8N813 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C3orf56Q8N813 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.06■□□□□ 0
C3orf56Q8N813 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C3orf56Q8N813 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C3orf56Q8N813 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
C3orf56Q8N813 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C3orf56Q8N813 AL645929.1-201ENST00000420084 975 ntBASIC15.06■□□□□ 0
C3orf56Q8N813 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.06■□□□□ 0
C3orf56Q8N813 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
C3orf56Q8N813 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.06■□□□□ 0
C3orf56Q8N813 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.06■□□□□ 0
C3orf56Q8N813 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.06■□□□□ 0
C3orf56Q8N813 AL160286.2-201ENST00000567150 934 ntBASIC15.06■□□□□ 0
C3orf56Q8N813 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.06■□□□□ 0
C3orf56Q8N813 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.06■□□□□ 0
C3orf56Q8N813 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
C3orf56Q8N813 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C3orf56Q8N813 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C3orf56Q8N813 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms