Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CPSF7Q8N684 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.86■□□□□ 0.61
CPSF7Q8N684 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.86■□□□□ 0.61
CPSF7Q8N684 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
CPSF7Q8N684 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.86■□□□□ 0.61
CPSF7Q8N684 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.86■□□□□ 0.61
CPSF7Q8N684 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.86■□□□□ 0.61
CPSF7Q8N684 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 TEX21P-204ENST00000641479 1693 ntBASIC18.85■□□□□ 0.61
CPSF7Q8N684 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPSF7Q8N684 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPSF7Q8N684 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPSF7Q8N684 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPSF7Q8N684 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPSF7Q8N684 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPSF7Q8N684 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CPSF7Q8N684 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPSF7Q8N684 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPSF7Q8N684 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CPSF7Q8N684 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPSF7Q8N684 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CPSF7Q8N684 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.85■□□□□ 0.61
CPSF7Q8N684 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPSF7Q8N684 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CPSF7Q8N684 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.85■□□□□ 0.61
CPSF7Q8N684 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPSF7Q8N684 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.85■□□□□ 0.61
CPSF7Q8N684 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
CPSF7Q8N684 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPSF7Q8N684 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPSF7Q8N684 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CPSF7Q8N684 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.85■□□□□ 0.61
CPSF7Q8N684 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CPSF7Q8N684 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CPSF7Q8N684 AC007613.1-201ENST00000572811 2597 ntBASIC18.85■□□□□ 0.61
CPSF7Q8N684 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CPSF7Q8N684 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPSF7Q8N684 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPSF7Q8N684 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.84■□□□□ 0.61
CPSF7Q8N684 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPSF7Q8N684 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.84■□□□□ 0.61
CPSF7Q8N684 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPSF7Q8N684 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.84■□□□□ 0.61
CPSF7Q8N684 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CPSF7Q8N684 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CPSF7Q8N684 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPSF7Q8N684 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.84■□□□□ 0.61
CPSF7Q8N684 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.84■□□□□ 0.61
CPSF7Q8N684 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.84■□□□□ 0.61
CPSF7Q8N684 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.84■□□□□ 0.61
CPSF7Q8N684 CYP2T3P-201ENST00000601990 817 ntBASIC18.84■□□□□ 0.61
CPSF7Q8N684 AC105020.6-201ENST00000621523 1217 ntBASIC18.84■□□□□ 0.61
CPSF7Q8N684 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.84■□□□□ 0.61
CPSF7Q8N684 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.84■□□□□ 0.61
CPSF7Q8N684 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPSF7Q8N684 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.84■□□□□ 0.61
CPSF7Q8N684 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
CPSF7Q8N684 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CPSF7Q8N684 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CPSF7Q8N684 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CPSF7Q8N684 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CPSF7Q8N684 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPSF7Q8N684 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CPSF7Q8N684 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.83■□□□□ 0.61
CPSF7Q8N684 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPSF7Q8N684 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPSF7Q8N684 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CPSF7Q8N684 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CPSF7Q8N684 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPSF7Q8N684 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.83■□□□□ 0.6
CPSF7Q8N684 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.83■□□□□ 0.6
CPSF7Q8N684 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.83■□□□□ 0.6
CPSF7Q8N684 AC135050.7-201ENST00000624508 2218 ntBASIC18.83■□□□□ 0.6
CPSF7Q8N684 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.83■□□□□ 0.6
CPSF7Q8N684 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.83■□□□□ 0.6
CPSF7Q8N684 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPSF7Q8N684 AL031598.1-201ENST00000561511 1773 ntBASIC18.83■□□□□ 0.6
CPSF7Q8N684 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.83■□□□□ 0.6
CPSF7Q8N684 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPSF7Q8N684 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.83■□□□□ 0.6
CPSF7Q8N684 AC104581.1-202ENST00000635932 2618 ntBASIC18.83■□□□□ 0.6
CPSF7Q8N684 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPSF7Q8N684 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CPSF7Q8N684 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.82■□□□□ 0.6
CPSF7Q8N684 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPSF7Q8N684 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CPSF7Q8N684 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPSF7Q8N684 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.82■□□□□ 0.6
CPSF7Q8N684 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPSF7Q8N684 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CPSF7Q8N684 AC093525.10-201ENST00000625130 1569 ntBASIC18.82■□□□□ 0.6
CPSF7Q8N684 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPSF7Q8N684 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.82■□□□□ 0.6
CPSF7Q8N684 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms