Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CARFQ8N187 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CARFQ8N187 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.32■□□□□ 0.52
CARFQ8N187 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CARFQ8N187 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CARFQ8N187 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CARFQ8N187 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.32■□□□□ 0.52
CARFQ8N187 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.32■□□□□ 0.52
CARFQ8N187 BX664615.1-201ENST00000443558 458 ntBASIC18.32■□□□□ 0.52
CARFQ8N187 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CARFQ8N187 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CARFQ8N187 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.32■□□□□ 0.52
CARFQ8N187 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CARFQ8N187 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CARFQ8N187 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CARFQ8N187 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CARFQ8N187 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CARFQ8N187 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CARFQ8N187 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.31■□□□□ 0.52
CARFQ8N187 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CARFQ8N187 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.31■□□□□ 0.52
CARFQ8N187 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.31■□□□□ 0.52
CARFQ8N187 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CARFQ8N187 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CARFQ8N187 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CARFQ8N187 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CARFQ8N187 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CARFQ8N187 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CARFQ8N187 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CARFQ8N187 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.31■□□□□ 0.52
CARFQ8N187 AC010203.1-204ENST00000548782 407 ntBASIC18.31■□□□□ 0.52
CARFQ8N187 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.31■□□□□ 0.52
CARFQ8N187 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.31■□□□□ 0.52
CARFQ8N187 AL590326.2-201ENST00000625139 305 ntBASIC18.31■□□□□ 0.52
CARFQ8N187 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CARFQ8N187 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.31■□□□□ 0.52
CARFQ8N187 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.31■□□□□ 0.52
CARFQ8N187 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CARFQ8N187 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CARFQ8N187 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CARFQ8N187 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CARFQ8N187 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CARFQ8N187 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CARFQ8N187 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CARFQ8N187 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CARFQ8N187 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
CARFQ8N187 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CARFQ8N187 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CARFQ8N187 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.3■□□□□ 0.52
CARFQ8N187 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CARFQ8N187 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CARFQ8N187 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CARFQ8N187 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.3■□□□□ 0.52
CARFQ8N187 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CARFQ8N187 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CARFQ8N187 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.3■□□□□ 0.52
CARFQ8N187 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.3■□□□□ 0.52
CARFQ8N187 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.3■□□□□ 0.52
CARFQ8N187 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CARFQ8N187 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CARFQ8N187 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CARFQ8N187 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CARFQ8N187 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CARFQ8N187 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CARFQ8N187 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CARFQ8N187 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.3■□□□□ 0.52
CARFQ8N187 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CARFQ8N187 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CARFQ8N187 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.3■□□□□ 0.52
CARFQ8N187 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.3■□□□□ 0.52
CARFQ8N187 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.29■□□□□ 0.52
CARFQ8N187 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CARFQ8N187 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.29■□□□□ 0.52
CARFQ8N187 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CARFQ8N187 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CARFQ8N187 INGX-201ENST00000359239 846 ntBASIC18.29■□□□□ 0.52
CARFQ8N187 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CARFQ8N187 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.29■□□□□ 0.52
CARFQ8N187 TSPY23P-201ENST00000440136 739 ntBASIC18.29■□□□□ 0.52
CARFQ8N187 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.29■□□□□ 0.52
CARFQ8N187 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.29■□□□□ 0.52
CARFQ8N187 AL138966.2-201ENST00000621997 464 ntBASIC18.29■□□□□ 0.52
CARFQ8N187 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CARFQ8N187 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.29■□□□□ 0.52
CARFQ8N187 TREX1-205ENST00000625293 1783 ntBASIC18.29■□□□□ 0.52
CARFQ8N187 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CARFQ8N187 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.29■□□□□ 0.52
CARFQ8N187 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CARFQ8N187 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CARFQ8N187 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CARFQ8N187 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.29■□□□□ 0.52
CARFQ8N187 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CARFQ8N187 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CARFQ8N187 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CARFQ8N187 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.28■□□□□ 0.52
CARFQ8N187 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CARFQ8N187 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.28■□□□□ 0.52
CARFQ8N187 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CARFQ8N187 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CARFQ8N187 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms