Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC170Q8IYT3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 AL512353.2-201ENST00000448759 1962 ntBASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC170Q8IYT3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.7■□□□□ 0.91
CCDC170Q8IYT3 KRT8P8-201ENST00000434750 1448 ntBASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC170Q8IYT3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 MKRN4P-201ENST00000444706 1521 ntBASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 AC007613.1-201ENST00000572811 2597 ntBASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 AL390961.4-201ENST00000623958 2535 ntBASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC170Q8IYT3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC170Q8IYT3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms