Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
UBR1Q8IWV7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC27.56■■■□□ 2
UBR1Q8IWV7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
UBR1Q8IWV7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
UBR1Q8IWV7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC27.55■■■□□ 2
UBR1Q8IWV7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC27.55■■■□□ 2
UBR1Q8IWV7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC27.55■■■□□ 2
UBR1Q8IWV7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC27.55■■■□□ 2
UBR1Q8IWV7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC27.55■■■□□ 2
UBR1Q8IWV7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
UBR1Q8IWV7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC27.55■■■□□ 2
UBR1Q8IWV7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC27.55■■■□□ 2
UBR1Q8IWV7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC27.55■■■□□ 2
UBR1Q8IWV7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC27.55■■■□□ 2
UBR1Q8IWV7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC27.55■■■□□ 2
UBR1Q8IWV7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC27.55■■■□□ 2
UBR1Q8IWV7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
UBR1Q8IWV7 AC011498.5-201ENST00000592027 486 ntBASIC27.55■■■□□ 2
UBR1Q8IWV7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
UBR1Q8IWV7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
UBR1Q8IWV7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
UBR1Q8IWV7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
UBR1Q8IWV7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC27.54■■■□□ 2
UBR1Q8IWV7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC27.54■■■□□ 2
UBR1Q8IWV7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC27.54■■■□□ 2
UBR1Q8IWV7 AC079602.3-201ENST00000623931 403 ntBASIC27.54■■■□□ 2
UBR1Q8IWV7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC27.54■■■□□ 2
UBR1Q8IWV7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC27.54■■■□□ 2
UBR1Q8IWV7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
UBR1Q8IWV7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
UBR1Q8IWV7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
UBR1Q8IWV7 GPAT2P1-201ENST00000444924 1672 ntBASIC27.53■■■□□ 2
UBR1Q8IWV7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC27.53■■■□□ 2
UBR1Q8IWV7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC27.53■■■□□ 2
UBR1Q8IWV7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
UBR1Q8IWV7 DRAXINP1-201ENST00000437611 948 ntBASIC27.53■■■□□ 2
UBR1Q8IWV7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC27.53■■■□□ 2
UBR1Q8IWV7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC27.53■■■□□ 2
UBR1Q8IWV7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC27.53■■■□□ 2
UBR1Q8IWV7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC27.53■■■□□ 2
UBR1Q8IWV7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC27.53■■■□□ 2
UBR1Q8IWV7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC27.53■■■□□ 2
UBR1Q8IWV7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
UBR1Q8IWV7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
UBR1Q8IWV7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
UBR1Q8IWV7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC27.53■■■□□ 2
UBR1Q8IWV7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC27.53■■■□□ 2
UBR1Q8IWV7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
UBR1Q8IWV7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC27.52■■■□□ 2
UBR1Q8IWV7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
UBR1Q8IWV7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
UBR1Q8IWV7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC27.52■■■□□ 2
UBR1Q8IWV7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC27.52■■■□□ 2
UBR1Q8IWV7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
UBR1Q8IWV7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC27.52■■■□□ 2
UBR1Q8IWV7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
UBR1Q8IWV7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC27.52■■■□□ 2
UBR1Q8IWV7 NUS1P1-201ENST00000446295 882 ntBASIC27.52■■■□□ 2
UBR1Q8IWV7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC27.52■■■□□ 2
UBR1Q8IWV7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC27.52■■■□□ 2
UBR1Q8IWV7 AL160237.2-201ENST00000556165 472 ntBASIC27.52■■■□□ 2
UBR1Q8IWV7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
UBR1Q8IWV7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC27.52■■■□□ 2
UBR1Q8IWV7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC27.52■■■□□ 2
UBR1Q8IWV7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC27.52■■■□□ 2
UBR1Q8IWV7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC27.51■■■□□ 2
UBR1Q8IWV7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC27.51■■□□□ 1.99
UBR1Q8IWV7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC27.51■■□□□ 1.99
UBR1Q8IWV7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.51■■□□□ 1.99
UBR1Q8IWV7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
UBR1Q8IWV7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
UBR1Q8IWV7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
UBR1Q8IWV7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC27.51■■□□□ 1.99
UBR1Q8IWV7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
UBR1Q8IWV7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
UBR1Q8IWV7 AP002469.2-201ENST00000531724 424 ntBASIC27.51■■□□□ 1.99
UBR1Q8IWV7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
UBR1Q8IWV7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC27.51■■□□□ 1.99
UBR1Q8IWV7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC27.51■■□□□ 1.99
UBR1Q8IWV7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC27.51■■□□□ 1.99
UBR1Q8IWV7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
UBR1Q8IWV7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
UBR1Q8IWV7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC27.5■■□□□ 1.99
UBR1Q8IWV7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms