Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 TEX21P-204ENST00000641479 1693 ntBASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 AC099791.1-201ENST00000416440 715 ntBASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD2Q8IV50 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 AL136162.1-201ENST00000607711 1078 ntBASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD2Q8IV50 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD2Q8IV50 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 AL136116.3-201ENST00000402907 1138 ntBASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms