Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PTCHD4Q6ZW05 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 C2orf69P4-201ENST00000565394 541 ntBASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 AC005181.1-201ENST00000604782 1256 ntBASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 AL589743.5-201ENST00000616611 1050 ntBASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 AC092437.1-201ENST00000624794 1048 ntBASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.75■□□□□ 0.43
PTCHD4Q6ZW05 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 AL512625.2-201ENST00000417533 625 ntBASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 AC006333.2-201ENST00000607957 2099 ntBASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCHD4Q6ZW05 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 IKBKGP1-201ENST00000612193 1073 ntBASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PTCHD4Q6ZW05 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.72■□□□□ 0.43
PTCHD4Q6ZW05 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms