Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 KRT17P3-201ENST00000420566 1262 ntBASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF549Q6P9A3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 AL161938.1-201ENST00000569833 2180 ntBASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 AL049812.1-201ENST00000432563 2267 ntBASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 PRKY-204ENST00000533551 1019 ntBASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF549Q6P9A3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.14■□□□□ 0.66
ZNF549Q6P9A3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ZNF549Q6P9A3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF549Q6P9A3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF549Q6P9A3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF549Q6P9A3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF549Q6P9A3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF549Q6P9A3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.14■□□□□ 0.65
ZNF549Q6P9A3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF549Q6P9A3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF549Q6P9A3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF549Q6P9A3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.14■□□□□ 0.65
ZNF549Q6P9A3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF549Q6P9A3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF549Q6P9A3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
ZNF549Q6P9A3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ZNF549Q6P9A3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF549Q6P9A3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZNF549Q6P9A3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 MIR4651-201ENST00000582622 73 ntBASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 AL023875.1-201ENST00000640777 796 ntBASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.13■□□□□ 0.65
ZNF549Q6P9A3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms