Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DQA1Q5Y7H0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 AC008550.1-201ENST00000511500 884 ntBASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.02■□□□□ 0.48
HLA-DQA1Q5Y7H0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DQA1Q5Y7H0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
HLA-DQA1Q5Y7H0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.02■□□□□ 0.47
HLA-DQA1Q5Y7H0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.02■□□□□ 0.47
HLA-DQA1Q5Y7H0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DQA1Q5Y7H0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DQA1Q5Y7H0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DQA1Q5Y7H0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 AC012618.2-201ENST00000428058 849 ntBASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 AF186192.3-201ENST00000583427 947 ntBASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 AC073195.1-201ENST00000607241 877 ntBASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.01■□□□□ 0.47
HLA-DQA1Q5Y7H0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 RPS2P55-201ENST00000397318 883 ntBASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 NIFKP9-201ENST00000419265 221 ntBASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 KSR1P1-201ENST00000446298 240 ntBASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 AC107956.1-201ENST00000494359 873 ntBASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 DET1-205ENST00000558413 583 ntTSL 4 BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 AL353708.3-201ENST00000610272 989 ntBASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DQA1Q5Y7H0 PWWP2AP1-201ENST00000429776 2273 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms