Protein–RNA interactions for Protein: Q5T2D3

OTUD3, OTU domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD3Q5T2D3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
OTUD3Q5T2D3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
OTUD3Q5T2D3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
OTUD3Q5T2D3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
OTUD3Q5T2D3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 AC093787.1-201ENST00000450396 207 ntBASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 AC133552.2-202ENST00000575694 574 ntBASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
OTUD3Q5T2D3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 AL512625.2-201ENST00000417533 625 ntBASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 AF201337.1-201ENST00000520239 748 ntBASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 AC105036.2-201ENST00000569468 176 ntBASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 AP001271.2-201ENST00000624018 1556 ntBASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
OTUD3Q5T2D3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 LTB4R2-202ENST00000528054 3092 ntBASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 AC010980.2-201ENST00000587099 1412 ntBASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 AL161938.1-201ENST00000569833 2180 ntBASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.24■□□□□ 0.51
OTUD3Q5T2D3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 KRT16P6-202ENST00000425692 1426 ntBASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 AL121832.2-201ENST00000610979 668 ntBASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 AL390961.4-201ENST00000623958 2535 ntBASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
OTUD3Q5T2D3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms