Protein–RNA interactions for Protein: Q5EBN2

TRIM61, Putative tripartite motif-containing protein 61, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM61Q5EBN2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM61Q5EBN2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRIM61Q5EBN2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM61Q5EBN2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 HBZP1-201ENST00000354915 429 ntBASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 AC111152.3-201ENST00000569699 673 ntBASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRIM61Q5EBN2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 FEM1AP1-201ENST00000431297 1995 ntBASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 AC004870.1-201ENST00000315132 882 ntBASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM61Q5EBN2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 AL845331.1-201ENST00000424978 1190 ntBASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.84■□□□□ 0.61
TRIM61Q5EBN2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.83■□□□□ 0.61
TRIM61Q5EBN2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.83■□□□□ 0.61
TRIM61Q5EBN2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.83■□□□□ 0.61
TRIM61Q5EBN2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM61Q5EBN2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.83■□□□□ 0.61
TRIM61Q5EBN2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM61Q5EBN2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM61Q5EBN2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM61Q5EBN2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM61Q5EBN2 FDX1P1-201ENST00000449115 551 ntBASIC18.83■□□□□ 0.6
TRIM61Q5EBN2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.83■□□□□ 0.6
TRIM61Q5EBN2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.83■□□□□ 0.6
TRIM61Q5EBN2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.83■□□□□ 0.6
TRIM61Q5EBN2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM61Q5EBN2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM61Q5EBN2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms