Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.95■□□□□ 0.46
RFX4Q33E94 CNN2P6-201ENST00000439038 900 ntBASIC17.95■□□□□ 0.46
RFX4Q33E94 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.95■□□□□ 0.46
RFX4Q33E94 DUX4L16-201ENST00000555130 1264 ntBASIC17.95■□□□□ 0.46
RFX4Q33E94 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RFX4Q33E94 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX4Q33E94 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFX4Q33E94 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.95■□□□□ 0.46
RFX4Q33E94 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.95■□□□□ 0.46
RFX4Q33E94 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
RFX4Q33E94 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX4Q33E94 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.95■□□□□ 0.46
RFX4Q33E94 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX4Q33E94 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX4Q33E94 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX4Q33E94 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFX4Q33E94 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX4Q33E94 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RFX4Q33E94 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX4Q33E94 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.94■□□□□ 0.46
RFX4Q33E94 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX4Q33E94 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.94■□□□□ 0.46
RFX4Q33E94 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFX4Q33E94 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX4Q33E94 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX4Q33E94 TEX21P-204ENST00000641479 1693 ntBASIC17.94■□□□□ 0.46
RFX4Q33E94 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.94■□□□□ 0.46
RFX4Q33E94 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX4Q33E94 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
RFX4Q33E94 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.94■□□□□ 0.46
RFX4Q33E94 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX4Q33E94 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RFX4Q33E94 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.94■□□□□ 0.46
RFX4Q33E94 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.94■□□□□ 0.46
RFX4Q33E94 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RFX4Q33E94 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.94■□□□□ 0.46
RFX4Q33E94 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.94■□□□□ 0.46
RFX4Q33E94 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFX4Q33E94 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.94■□□□□ 0.46
RFX4Q33E94 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.94■□□□□ 0.46
RFX4Q33E94 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX4Q33E94 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RFX4Q33E94 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX4Q33E94 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFX4Q33E94 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.94■□□□□ 0.46
RFX4Q33E94 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX4Q33E94 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.94■□□□□ 0.46
RFX4Q33E94 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.94■□□□□ 0.46
RFX4Q33E94 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX4Q33E94 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.93■□□□□ 0.46
RFX4Q33E94 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 AL354751.1-201ENST00000412768 1863 ntBASIC17.93■□□□□ 0.46
RFX4Q33E94 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
RFX4Q33E94 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
RFX4Q33E94 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 AC016769.1-201ENST00000409132 1010 ntBASIC17.93■□□□□ 0.46
RFX4Q33E94 KRT18P5-201ENST00000436075 1291 ntBASIC17.93■□□□□ 0.46
RFX4Q33E94 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.93■□□□□ 0.46
RFX4Q33E94 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.93■□□□□ 0.46
RFX4Q33E94 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.93■□□□□ 0.46
RFX4Q33E94 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
RFX4Q33E94 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.93■□□□□ 0.46
RFX4Q33E94 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.93■□□□□ 0.46
RFX4Q33E94 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.93■□□□□ 0.46
RFX4Q33E94 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RFX4Q33E94 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.93■□□□□ 0.46
RFX4Q33E94 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX4Q33E94 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX4Q33E94 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX4Q33E94 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.92■□□□□ 0.46
RFX4Q33E94 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX4Q33E94 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX4Q33E94 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFX4Q33E94 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFX4Q33E94 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RFX4Q33E94 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms