Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 AC006970.2-201ENST00000450065 779 ntBASIC14.75□□□□□ -0.05
HIST1H1AQ02539 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 AL050303.2-201ENST00000619798 666 ntBASIC14.75□□□□□ -0.05
HIST1H1AQ02539 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
HIST1H1AQ02539 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 NOC2LP1-202ENST00000452600 2235 ntBASIC14.74□□□□□ -0.05
HIST1H1AQ02539 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 GPX1P1-201ENST00000388829 606 ntBASIC14.74□□□□□ -0.05
HIST1H1AQ02539 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H1AQ02539 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 AL032819.2-201ENST00000624543 2162 ntBASIC14.73□□□□□ -0.05
HIST1H1AQ02539 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 AC007613.1-201ENST00000572811 2597 ntBASIC14.73□□□□□ -0.05
HIST1H1AQ02539 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 AL390719.1-204ENST00000412397 1219 ntBASIC14.73□□□□□ -0.05
HIST1H1AQ02539 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms