Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
HTRA3P83110 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.51■■□□□ 1.19
HTRA3P83110 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HTRA3P83110 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HTRA3P83110 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HTRA3P83110 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
HTRA3P83110 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HTRA3P83110 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.51■■□□□ 1.19
HTRA3P83110 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC22.51■■□□□ 1.19
HTRA3P83110 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC22.51■■□□□ 1.19
HTRA3P83110 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
HTRA3P83110 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HTRA3P83110 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
HTRA3P83110 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HTRA3P83110 Z83836.1-201ENST00000624605 1642 ntBASIC22.5■■□□□ 1.19
HTRA3P83110 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HTRA3P83110 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.5■■□□□ 1.19
HTRA3P83110 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HTRA3P83110 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
HTRA3P83110 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HTRA3P83110 DNAJB3-202ENST00000449667 1266 ntBASIC22.5■■□□□ 1.19
HTRA3P83110 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
HTRA3P83110 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC22.5■■□□□ 1.19
HTRA3P83110 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.5■■□□□ 1.19
HTRA3P83110 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.5■■□□□ 1.19
HTRA3P83110 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
HTRA3P83110 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.5■■□□□ 1.19
HTRA3P83110 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HTRA3P83110 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.5■■□□□ 1.19
HTRA3P83110 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HTRA3P83110 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HTRA3P83110 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HTRA3P83110 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HTRA3P83110 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
HTRA3P83110 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC22.49■■□□□ 1.19
HTRA3P83110 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC22.49■■□□□ 1.19
HTRA3P83110 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.49■■□□□ 1.19
HTRA3P83110 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HTRA3P83110 IGHV3OR16-7-201ENST00000604106 360 ntBASIC22.49■■□□□ 1.19
HTRA3P83110 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
HTRA3P83110 KRT18P28-201ENST00000453838 1332 ntBASIC22.49■■□□□ 1.19
HTRA3P83110 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HTRA3P83110 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
HTRA3P83110 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTRA3P83110 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTRA3P83110 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTRA3P83110 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTRA3P83110 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HTRA3P83110 YBX2P1-201ENST00000394192 760 ntBASIC22.48■■□□□ 1.19
HTRA3P83110 WDR53-203ENST00000429115 683 ntTSL 2 BASIC22.48■■□□□ 1.19
HTRA3P83110 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC22.48■■□□□ 1.19
HTRA3P83110 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.48■■□□□ 1.19
HTRA3P83110 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC22.48■■□□□ 1.19
HTRA3P83110 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC22.48■■□□□ 1.19
HTRA3P83110 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC22.48■■□□□ 1.19
HTRA3P83110 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC22.48■■□□□ 1.19
HTRA3P83110 AL136038.4-201ENST00000603606 1261 ntBASIC22.48■■□□□ 1.19
HTRA3P83110 IGHV3-41-201ENST00000613121 348 ntBASIC22.48■■□□□ 1.19
HTRA3P83110 CAND2-206ENST00000626378 333 ntTSL 5 BASIC22.48■■□□□ 1.19
HTRA3P83110 AL157888.1-201ENST00000631930 593 ntBASIC22.48■■□□□ 1.19
HTRA3P83110 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HTRA3P83110 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.48■■□□□ 1.19
HTRA3P83110 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC22.48■■□□□ 1.19
HTRA3P83110 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTRA3P83110 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC22.48■■□□□ 1.19
HTRA3P83110 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTRA3P83110 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
HTRA3P83110 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC22.47■■□□□ 1.19
HTRA3P83110 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
HTRA3P83110 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.47■■□□□ 1.19
HTRA3P83110 AL391807.1-203ENST00000604392 2365 ntBASIC22.47■■□□□ 1.19
HTRA3P83110 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HTRA3P83110 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HTRA3P83110 METTL21AP1-201ENST00000438852 635 ntBASIC22.47■■□□□ 1.19
HTRA3P83110 NMU-202ENST00000505262 693 ntTSL 3 BASIC22.47■■□□□ 1.19
HTRA3P83110 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
HTRA3P83110 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HTRA3P83110 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC22.47■■□□□ 1.19
HTRA3P83110 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.47■■□□□ 1.19
HTRA3P83110 AC116407.3-201ENST00000623905 1129 ntBASIC22.47■■□□□ 1.19
HTRA3P83110 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HTRA3P83110 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
HTRA3P83110 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
HTRA3P83110 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC22.47■■□□□ 1.19
HTRA3P83110 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HTRA3P83110 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HTRA3P83110 TMEM179-206ENST00000616017 1645 ntBASIC22.46■■□□□ 1.19
HTRA3P83110 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
HTRA3P83110 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC22.46■■□□□ 1.19
HTRA3P83110 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
HTRA3P83110 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HTRA3P83110 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC22.46■■□□□ 1.19
HTRA3P83110 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HTRA3P83110 RFPL4AP1-201ENST00000530883 850 ntBASIC22.46■■□□□ 1.19
HTRA3P83110 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HTRA3P83110 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC22.46■■□□□ 1.19
HTRA3P83110 Z69720.1-201ENST00000601483 472 ntBASIC22.46■■□□□ 1.19
HTRA3P83110 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC22.46■■□□□ 1.19
HTRA3P83110 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HTRA3P83110 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms