Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IRX4P78413 AL691432.2-201ENST00000607222 2038 ntBASIC20.04■□□□□ 0.8
IRX4P78413 BX323043.1-201ENST00000641006 1765 ntBASIC20.04■□□□□ 0.8
IRX4P78413 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
IRX4P78413 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IRX4P78413 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IRX4P78413 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IRX4P78413 PGM5P4-201ENST00000421970 445 ntBASIC20.04■□□□□ 0.8
IRX4P78413 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
IRX4P78413 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IRX4P78413 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.04■□□□□ 0.8
IRX4P78413 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.04■□□□□ 0.8
IRX4P78413 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.04■□□□□ 0.8
IRX4P78413 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.04■□□□□ 0.8
IRX4P78413 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IRX4P78413 AL590326.2-201ENST00000625139 305 ntBASIC20.04■□□□□ 0.8
IRX4P78413 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.04■□□□□ 0.8
IRX4P78413 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IRX4P78413 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IRX4P78413 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IRX4P78413 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IRX4P78413 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IRX4P78413 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
IRX4P78413 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
IRX4P78413 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
IRX4P78413 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
IRX4P78413 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IRX4P78413 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.03■□□□□ 0.8
IRX4P78413 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IRX4P78413 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IRX4P78413 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IRX4P78413 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.03■□□□□ 0.8
IRX4P78413 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IRX4P78413 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.03■□□□□ 0.8
IRX4P78413 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IRX4P78413 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.03■□□□□ 0.8
IRX4P78413 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
IRX4P78413 AF186192.3-201ENST00000583427 947 ntBASIC20.03■□□□□ 0.8
IRX4P78413 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
IRX4P78413 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IRX4P78413 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IRX4P78413 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IRX4P78413 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IRX4P78413 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
IRX4P78413 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.03■□□□□ 0.8
IRX4P78413 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IRX4P78413 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
IRX4P78413 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IRX4P78413 HCG11-201ENST00000411553 5696 ntBASIC20.02■□□□□ 0.8
IRX4P78413 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IRX4P78413 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IRX4P78413 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IRX4P78413 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
IRX4P78413 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.02■□□□□ 0.8
IRX4P78413 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
IRX4P78413 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IRX4P78413 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
IRX4P78413 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IRX4P78413 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
IRX4P78413 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.02■□□□□ 0.8
IRX4P78413 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.02■□□□□ 0.8
IRX4P78413 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IRX4P78413 AL356652.1-201ENST00000615962 565 ntBASIC20.02■□□□□ 0.8
IRX4P78413 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IRX4P78413 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.02■□□□□ 0.8
IRX4P78413 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.02■□□□□ 0.8
IRX4P78413 AC092865.7-201ENST00000641832 219 ntBASIC20.02■□□□□ 0.8
IRX4P78413 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
IRX4P78413 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IRX4P78413 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IRX4P78413 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IRX4P78413 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IRX4P78413 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
IRX4P78413 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
IRX4P78413 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.02■□□□□ 0.79
IRX4P78413 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
IRX4P78413 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
IRX4P78413 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
IRX4P78413 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
IRX4P78413 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
IRX4P78413 HTR7P1-201ENST00000538670 1336 ntBASIC20.02■□□□□ 0.79
IRX4P78413 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX4P78413 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
IRX4P78413 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX4P78413 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.01■□□□□ 0.79
IRX4P78413 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX4P78413 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX4P78413 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX4P78413 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX4P78413 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
IRX4P78413 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX4P78413 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.01■□□□□ 0.79
IRX4P78413 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.01■□□□□ 0.79
IRX4P78413 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.01■□□□□ 0.79
IRX4P78413 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.01■□□□□ 0.79
IRX4P78413 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IRX4P78413 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
IRX4P78413 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.01■□□□□ 0.79
IRX4P78413 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
IRX4P78413 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms