Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13.65□□□□□ -0.22
RPL39P62891 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.65□□□□□ -0.22
RPL39P62891 AC142381.2-201ENST00000566120 298 ntBASIC13.65□□□□□ -0.22
RPL39P62891 AC016405.3-201ENST00000607710 860 ntBASIC13.65□□□□□ -0.22
RPL39P62891 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.65□□□□□ -0.22
RPL39P62891 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.65□□□□□ -0.22
RPL39P62891 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.65□□□□□ -0.22
RPL39P62891 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.65□□□□□ -0.22
RPL39P62891 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RPL39P62891 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RPL39P62891 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.65□□□□□ -0.22
RPL39P62891 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RPL39P62891 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RPL39P62891 FP475955.4-201ENST00000623131 1990 ntBASIC13.65□□□□□ -0.22
RPL39P62891 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL39P62891 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.65□□□□□ -0.22
RPL39P62891 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RPL39P62891 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.64□□□□□ -0.23
RPL39P62891 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RPL39P62891 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.64□□□□□ -0.23
RPL39P62891 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.64□□□□□ -0.23
RPL39P62891 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.64□□□□□ -0.23
RPL39P62891 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
RPL39P62891 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 AL031598.1-201ENST00000561511 1773 ntBASIC13.64□□□□□ -0.23
RPL39P62891 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.64□□□□□ -0.23
RPL39P62891 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.64□□□□□ -0.23
RPL39P62891 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RPL39P62891 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.64□□□□□ -0.23
RPL39P62891 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.64□□□□□ -0.23
RPL39P62891 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.64□□□□□ -0.23
RPL39P62891 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 MYCNOS-205ENST00000641950 531 ntBASIC13.64□□□□□ -0.23
RPL39P62891 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RPL39P62891 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RPL39P62891 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.64□□□□□ -0.23
RPL39P62891 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RPL39P62891 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.64□□□□□ -0.23
RPL39P62891 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.64□□□□□ -0.23
RPL39P62891 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RPL39P62891 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL39P62891 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.63□□□□□ -0.23
RPL39P62891 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.63□□□□□ -0.23
RPL39P62891 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RPL39P62891 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.63□□□□□ -0.23
RPL39P62891 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.63□□□□□ -0.23
RPL39P62891 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RPL39P62891 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RPL39P62891 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.63□□□□□ -0.23
RPL39P62891 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC13.63□□□□□ -0.23
RPL39P62891 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.63□□□□□ -0.23
RPL39P62891 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.63□□□□□ -0.23
RPL39P62891 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.63□□□□□ -0.23
RPL39P62891 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RPL39P62891 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.63□□□□□ -0.23
RPL39P62891 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RPL39P62891 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPL39P62891 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms