Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN12P56749 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN12P56749 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN12P56749 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.79■□□□□ 0.28
CLDN12P56749 AC018553.1-201ENST00000616682 1458 ntBASIC16.79■□□□□ 0.28
CLDN12P56749 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN12P56749 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN12P56749 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN12P56749 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLDN12P56749 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN12P56749 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN12P56749 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CLDN12P56749 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN12P56749 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN12P56749 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLDN12P56749 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLDN12P56749 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN12P56749 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN12P56749 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN12P56749 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN12P56749 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN12P56749 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN12P56749 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN12P56749 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN12P56749 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CLDN12P56749 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.78■□□□□ 0.28
CLDN12P56749 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN12P56749 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.78■□□□□ 0.28
CLDN12P56749 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN12P56749 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CLDN12P56749 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN12P56749 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN12P56749 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN12P56749 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN12P56749 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN12P56749 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN12P56749 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN12P56749 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN12P56749 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CLDN12P56749 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN12P56749 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN12P56749 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN12P56749 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN12P56749 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CLDN12P56749 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN12P56749 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.77■□□□□ 0.28
CLDN12P56749 AL355472.2-201ENST00000422958 438 ntBASIC16.77■□□□□ 0.28
CLDN12P56749 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN12P56749 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN12P56749 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN12P56749 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN12P56749 HTR7P1-202ENST00000624664 4411 ntBASIC16.77■□□□□ 0.28
CLDN12P56749 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN12P56749 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN12P56749 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDN12P56749 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CLDN12P56749 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CLDN12P56749 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.77■□□□□ 0.27
CLDN12P56749 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN12P56749 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLDN12P56749 AL031598.1-201ENST00000561511 1773 ntBASIC16.77■□□□□ 0.27
CLDN12P56749 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CLDN12P56749 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CLDN12P56749 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN12P56749 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.76■□□□□ 0.27
CLDN12P56749 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN12P56749 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN12P56749 PCDHB18P-201ENST00000524813 2368 ntBASIC16.76■□□□□ 0.27
CLDN12P56749 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN12P56749 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.76■□□□□ 0.27
CLDN12P56749 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN12P56749 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
CLDN12P56749 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN12P56749 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN12P56749 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.76■□□□□ 0.27
CLDN12P56749 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CLDN12P56749 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLDN12P56749 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN12P56749 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLDN12P56749 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CLDN12P56749 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms