Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 RPS2P55-201ENST00000397318 883 ntBASIC20.64■□□□□ 0.89
RAD23BP54727 AL353807.1-201ENST00000427475 662 ntBASIC20.64■□□□□ 0.89
RAD23BP54727 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAD23BP54727 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAD23BP54727 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAD23BP54727 AP002982.1-201ENST00000492365 877 ntBASIC20.64■□□□□ 0.89
RAD23BP54727 AC107956.1-201ENST00000494359 873 ntBASIC20.64■□□□□ 0.89
RAD23BP54727 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.64■□□□□ 0.89
RAD23BP54727 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.64■□□□□ 0.89
RAD23BP54727 Z99916.2-201ENST00000604037 246 ntBASIC20.64■□□□□ 0.89
RAD23BP54727 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAD23BP54727 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAD23BP54727 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.64■□□□□ 0.89
RAD23BP54727 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RAD23BP54727 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAD23BP54727 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAD23BP54727 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAD23BP54727 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.63■□□□□ 0.89
RAD23BP54727 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
RAD23BP54727 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RAD23BP54727 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAD23BP54727 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
RAD23BP54727 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAD23BP54727 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAD23BP54727 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.63■□□□□ 0.89
RAD23BP54727 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.63■□□□□ 0.89
RAD23BP54727 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.63■□□□□ 0.89
RAD23BP54727 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.63■□□□□ 0.89
RAD23BP54727 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.63■□□□□ 0.89
RAD23BP54727 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAD23BP54727 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAD23BP54727 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAD23BP54727 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RAD23BP54727 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.63■□□□□ 0.89
RAD23BP54727 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAD23BP54727 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.63■□□□□ 0.89
RAD23BP54727 AL135905.2-201ENST00000584934 1404 ntBASIC20.62■□□□□ 0.89
RAD23BP54727 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RAD23BP54727 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAD23BP54727 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAD23BP54727 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAD23BP54727 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAD23BP54727 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.62■□□□□ 0.89
RAD23BP54727 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.62■□□□□ 0.89
RAD23BP54727 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAD23BP54727 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAD23BP54727 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAD23BP54727 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAD23BP54727 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAD23BP54727 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAD23BP54727 AC008550.1-201ENST00000511500 884 ntBASIC20.62■□□□□ 0.89
RAD23BP54727 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.62■□□□□ 0.89
RAD23BP54727 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.62■□□□□ 0.89
RAD23BP54727 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.62■□□□□ 0.89
RAD23BP54727 AC233702.5-201ENST00000584107 538 ntBASIC20.62■□□□□ 0.89
RAD23BP54727 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.62■□□□□ 0.89
RAD23BP54727 AL445675.2-201ENST00000620291 557 ntBASIC20.62■□□□□ 0.89
RAD23BP54727 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.62■□□□□ 0.89
RAD23BP54727 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
RAD23BP54727 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
RAD23BP54727 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAD23BP54727 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.62■□□□□ 0.89
RAD23BP54727 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAD23BP54727 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAD23BP54727 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAD23BP54727 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.61■□□□□ 0.89
RAD23BP54727 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAD23BP54727 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.61■□□□□ 0.89
RAD23BP54727 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAD23BP54727 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAD23BP54727 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAD23BP54727 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAD23BP54727 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAD23BP54727 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RAD23BP54727 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.61■□□□□ 0.89
RAD23BP54727 AC012618.2-201ENST00000428058 849 ntBASIC20.61■□□□□ 0.89
RAD23BP54727 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.61■□□□□ 0.89
RAD23BP54727 KSR1P1-201ENST00000446298 240 ntBASIC20.61■□□□□ 0.89
RAD23BP54727 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAD23BP54727 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.61■□□□□ 0.89
RAD23BP54727 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAD23BP54727 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAD23BP54727 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAD23BP54727 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.61■□□□□ 0.89
RAD23BP54727 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.61■□□□□ 0.89
RAD23BP54727 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAD23BP54727 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAD23BP54727 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RAD23BP54727 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAD23BP54727 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAD23BP54727 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAD23BP54727 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAD23BP54727 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAD23BP54727 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAD23BP54727 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAD23BP54727 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAD23BP54727 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.6■□□□□ 0.89
RAD23BP54727 AC116562.4-201ENST00000641316 2276 ntBASIC20.6■□□□□ 0.89
RAD23BP54727 SDHAP1-207ENST00000440850 2000 ntBASIC20.6■□□□□ 0.89
RAD23BP54727 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms