Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CLCN4P51793 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.33■□□□□ 0.85
CLCN4P51793 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.33■□□□□ 0.85
CLCN4P51793 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN4P51793 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN4P51793 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN4P51793 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN4P51793 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.33■□□□□ 0.85
CLCN4P51793 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN4P51793 PRSS44-201ENST00000515154 1146 ntBASIC20.33■□□□□ 0.85
CLCN4P51793 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.33■□□□□ 0.85
CLCN4P51793 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.33■□□□□ 0.85
CLCN4P51793 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.33■□□□□ 0.85
CLCN4P51793 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN4P51793 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.33■□□□□ 0.85
CLCN4P51793 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.33■□□□□ 0.85
CLCN4P51793 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.33■□□□□ 0.85
CLCN4P51793 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLCN4P51793 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN4P51793 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.33■□□□□ 0.84
CLCN4P51793 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.33■□□□□ 0.84
CLCN4P51793 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.33■□□□□ 0.84
CLCN4P51793 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
CLCN4P51793 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN4P51793 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN4P51793 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN4P51793 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLCN4P51793 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CLCN4P51793 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
CLCN4P51793 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CLCN4P51793 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.32■□□□□ 0.84
CLCN4P51793 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CLCN4P51793 AL157384.1-201ENST00000445995 2473 ntBASIC20.32■□□□□ 0.84
CLCN4P51793 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLCN4P51793 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN4P51793 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN4P51793 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.32■□□□□ 0.84
CLCN4P51793 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLCN4P51793 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CLCN4P51793 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLCN4P51793 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN4P51793 KRT18P38-201ENST00000449496 1282 ntBASIC20.32■□□□□ 0.84
CLCN4P51793 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCN4P51793 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN4P51793 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.32■□□□□ 0.84
CLCN4P51793 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CLCN4P51793 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN4P51793 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN4P51793 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN4P51793 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN4P51793 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCN4P51793 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLCN4P51793 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.31■□□□□ 0.84
CLCN4P51793 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN4P51793 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN4P51793 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.31■□□□□ 0.84
CLCN4P51793 AC005332.1-201ENST00000577698 1310 ntBASIC20.31■□□□□ 0.84
CLCN4P51793 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.31■□□□□ 0.84
CLCN4P51793 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.31■□□□□ 0.84
CLCN4P51793 KRT8P11-201ENST00000409686 1436 ntBASIC20.31■□□□□ 0.84
CLCN4P51793 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN4P51793 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CLCN4P51793 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN4P51793 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN4P51793 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN4P51793 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.31■□□□□ 0.84
CLCN4P51793 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN4P51793 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.31■□□□□ 0.84
CLCN4P51793 KRT126P-201ENST00000549467 1181 ntBASIC20.31■□□□□ 0.84
CLCN4P51793 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.31■□□□□ 0.84
CLCN4P51793 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.31■□□□□ 0.84
CLCN4P51793 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
CLCN4P51793 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN4P51793 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN4P51793 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN4P51793 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN4P51793 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN4P51793 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CLCN4P51793 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCN4P51793 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN4P51793 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN4P51793 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN4P51793 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CLCN4P51793 AC073314.1-201ENST00000568729 2216 ntBASIC20.3■□□□□ 0.84
CLCN4P51793 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CLCN4P51793 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN4P51793 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.3■□□□□ 0.84
CLCN4P51793 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN4P51793 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.3■□□□□ 0.84
CLCN4P51793 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN4P51793 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CLCN4P51793 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.3■□□□□ 0.84
CLCN4P51793 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.3■□□□□ 0.84
CLCN4P51793 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.3■□□□□ 0.84
CLCN4P51793 AC116407.4-201ENST00000623319 1061 ntBASIC20.3■□□□□ 0.84
CLCN4P51793 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN4P51793 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.3■□□□□ 0.84
CLCN4P51793 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCN4P51793 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.3■□□□□ 0.84
CLCN4P51793 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms