Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
USP11P51784 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.85■■□□□ 1.09
USP11P51784 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
USP11P51784 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.85■■□□□ 1.09
USP11P51784 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.85■■□□□ 1.09
USP11P51784 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
USP11P51784 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.85■■□□□ 1.09
USP11P51784 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
USP11P51784 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP11P51784 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP11P51784 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
USP11P51784 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
USP11P51784 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
USP11P51784 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
USP11P51784 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.84■■□□□ 1.09
USP11P51784 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP11P51784 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP11P51784 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.84■■□□□ 1.09
USP11P51784 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP11P51784 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.84■■□□□ 1.09
USP11P51784 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP11P51784 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP11P51784 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.84■■□□□ 1.09
USP11P51784 TSPY15P-201ENST00000457163 923 ntBASIC21.84■■□□□ 1.09
USP11P51784 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
USP11P51784 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.84■■□□□ 1.09
USP11P51784 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.84■■□□□ 1.09
USP11P51784 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP11P51784 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP11P51784 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP11P51784 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.84■■□□□ 1.09
USP11P51784 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.84■■□□□ 1.09
USP11P51784 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.84■■□□□ 1.09
USP11P51784 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP11P51784 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP11P51784 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
USP11P51784 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
USP11P51784 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.83■■□□□ 1.09
USP11P51784 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
USP11P51784 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
USP11P51784 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.83■■□□□ 1.09
USP11P51784 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.83■■□□□ 1.09
USP11P51784 AC093484.2-201ENST00000580996 2166 ntBASIC21.83■■□□□ 1.09
USP11P51784 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
USP11P51784 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
USP11P51784 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
USP11P51784 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.83■■□□□ 1.09
USP11P51784 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.83■■□□□ 1.09
USP11P51784 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
USP11P51784 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.09
USP11P51784 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
USP11P51784 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
USP11P51784 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.83■■□□□ 1.08
USP11P51784 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
USP11P51784 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
USP11P51784 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
USP11P51784 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
USP11P51784 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP11P51784 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP11P51784 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.82■■□□□ 1.08
USP11P51784 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.82■■□□□ 1.08
USP11P51784 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
USP11P51784 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.82■■□□□ 1.08
USP11P51784 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
USP11P51784 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.82■■□□□ 1.08
USP11P51784 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
USP11P51784 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP11P51784 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
USP11P51784 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
USP11P51784 FAM207BP-201ENST00000447172 505 ntBASIC21.82■■□□□ 1.08
USP11P51784 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.82■■□□□ 1.08
USP11P51784 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.82■■□□□ 1.08
USP11P51784 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.82■■□□□ 1.08
USP11P51784 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.82■■□□□ 1.08
USP11P51784 AC079598.2-202ENST00000546624 1451 ntBASIC21.82■■□□□ 1.08
USP11P51784 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
USP11P51784 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
USP11P51784 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
USP11P51784 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP11P51784 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
USP11P51784 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP11P51784 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP11P51784 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.81■■□□□ 1.08
USP11P51784 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
USP11P51784 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.81■■□□□ 1.08
USP11P51784 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.81■■□□□ 1.08
USP11P51784 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.81■■□□□ 1.08
USP11P51784 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.81■■□□□ 1.08
USP11P51784 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
USP11P51784 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP11P51784 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
USP11P51784 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
USP11P51784 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP11P51784 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.8■■□□□ 1.08
USP11P51784 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP11P51784 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
USP11P51784 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.8■■□□□ 1.08
USP11P51784 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
USP11P51784 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
USP11P51784 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms