Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6CP51160 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.84■□□□□ 0.93
PDE6CP51160 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6CP51160 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6CP51160 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6CP51160 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.84■□□□□ 0.93
PDE6CP51160 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.84■□□□□ 0.93
PDE6CP51160 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6CP51160 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.84■□□□□ 0.93
PDE6CP51160 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6CP51160 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PDE6CP51160 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6CP51160 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6CP51160 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6CP51160 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6CP51160 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PDE6CP51160 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6CP51160 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.83■□□□□ 0.93
PDE6CP51160 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6CP51160 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6CP51160 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6CP51160 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.83■□□□□ 0.93
PDE6CP51160 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6CP51160 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6CP51160 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PDE6CP51160 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6CP51160 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PDE6CP51160 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6CP51160 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6CP51160 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.83■□□□□ 0.93
PDE6CP51160 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.83■□□□□ 0.93
PDE6CP51160 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
PDE6CP51160 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.83■□□□□ 0.93
PDE6CP51160 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6CP51160 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6CP51160 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.83■□□□□ 0.92
PDE6CP51160 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
PDE6CP51160 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PDE6CP51160 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDE6CP51160 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.83■□□□□ 0.92
PDE6CP51160 AL032819.2-201ENST00000624543 2162 ntBASIC20.83■□□□□ 0.92
PDE6CP51160 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDE6CP51160 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.83■□□□□ 0.92
PDE6CP51160 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PDE6CP51160 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
PDE6CP51160 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PDE6CP51160 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6CP51160 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.82■□□□□ 0.92
PDE6CP51160 AC018445.3-201ENST00000624177 1945 ntBASIC20.82■□□□□ 0.92
PDE6CP51160 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6CP51160 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6CP51160 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6CP51160 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6CP51160 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6CP51160 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.82■□□□□ 0.92
PDE6CP51160 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.82■□□□□ 0.92
PDE6CP51160 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6CP51160 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.82■□□□□ 0.92
PDE6CP51160 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.82■□□□□ 0.92
PDE6CP51160 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6CP51160 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6CP51160 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6CP51160 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6CP51160 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.82■□□□□ 0.92
PDE6CP51160 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.81■□□□□ 0.92
PDE6CP51160 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 KRT17P2-201ENST00000300992 1314 ntBASIC20.81■□□□□ 0.92
PDE6CP51160 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
PDE6CP51160 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
PDE6CP51160 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PDE6CP51160 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.81■□□□□ 0.92
PDE6CP51160 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PDE6CP51160 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 SNORA78-201ENST00000459373 127 ntBASIC20.81■□□□□ 0.92
PDE6CP51160 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.81■□□□□ 0.92
PDE6CP51160 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.81■□□□□ 0.92
PDE6CP51160 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.81■□□□□ 0.92
PDE6CP51160 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.81■□□□□ 0.92
PDE6CP51160 AC004264.1-201ENST00000608354 794 ntBASIC20.81■□□□□ 0.92
PDE6CP51160 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PDE6CP51160 BX323043.1-201ENST00000641006 1765 ntBASIC20.81■□□□□ 0.92
PDE6CP51160 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.81■□□□□ 0.92
PDE6CP51160 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.81■□□□□ 0.92
PDE6CP51160 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PDE6CP51160 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6CP51160 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.81■□□□□ 0.92
PDE6CP51160 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms