Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC1A3P43003 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC1A3P43003 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC1A3P43003 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A3P43003 PRKY-204ENST00000533551 1019 ntBASIC17.75■□□□□ 0.43
SLC1A3P43003 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC1A3P43003 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC1A3P43003 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC1A3P43003 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A3P43003 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC1A3P43003 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A3P43003 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC1A3P43003 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A3P43003 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A3P43003 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
SLC1A3P43003 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A3P43003 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A3P43003 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A3P43003 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC1A3P43003 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC1A3P43003 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SLC1A3P43003 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC1A3P43003 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC1A3P43003 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC1A3P43003 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC1A3P43003 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SLC1A3P43003 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
SLC1A3P43003 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.74■□□□□ 0.43
SLC1A3P43003 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC1A3P43003 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SLC1A3P43003 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SLC1A3P43003 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC1A3P43003 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC1A3P43003 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A3P43003 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC1A3P43003 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC1A3P43003 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC1A3P43003 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC1A3P43003 KRT18P16-201ENST00000510337 1294 ntBASIC17.73■□□□□ 0.43
SLC1A3P43003 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC1A3P43003 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC1A3P43003 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A3P43003 KRT8P8-201ENST00000434750 1448 ntBASIC17.72■□□□□ 0.43
SLC1A3P43003 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A3P43003 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A3P43003 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A3P43003 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC1A3P43003 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A3P43003 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SLC1A3P43003 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A3P43003 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A3P43003 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC1A3P43003 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
SLC1A3P43003 ESRRAP1-201ENST00000400596 1257 ntBASIC17.72■□□□□ 0.43
SLC1A3P43003 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.72■□□□□ 0.43
SLC1A3P43003 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC1A3P43003 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC1A3P43003 AC069544.1-201ENST00000609399 999 ntBASIC17.72■□□□□ 0.43
SLC1A3P43003 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A3P43003 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A3P43003 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A3P43003 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SLC1A3P43003 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SLC1A3P43003 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC1A3P43003 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms