Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 TUBB8P6-201ENST00000436895 1288 ntBASIC19.52■□□□□ 0.72
HADHAP40939 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.52■□□□□ 0.72
HADHAP40939 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.52■□□□□ 0.72
HADHAP40939 KRT18P16-201ENST00000510337 1294 ntBASIC19.52■□□□□ 0.72
HADHAP40939 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.52■□□□□ 0.72
HADHAP40939 MIR4651-201ENST00000582622 73 ntBASIC19.52■□□□□ 0.72
HADHAP40939 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
HADHAP40939 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.52■□□□□ 0.72
HADHAP40939 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 NBPF21P-201ENST00000425093 1451 ntBASIC19.52■□□□□ 0.72
HADHAP40939 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HADHAP40939 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
HADHAP40939 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.52■□□□□ 0.71
HADHAP40939 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HADHAP40939 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HADHAP40939 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.52■□□□□ 0.71
HADHAP40939 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
HADHAP40939 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.52■□□□□ 0.71
HADHAP40939 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.51■□□□□ 0.71
HADHAP40939 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HADHAP40939 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
HADHAP40939 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HADHAP40939 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.51■□□□□ 0.71
HADHAP40939 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
HADHAP40939 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.51■□□□□ 0.71
HADHAP40939 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HADHAP40939 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HADHAP40939 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HADHAP40939 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
HADHAP40939 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.51■□□□□ 0.71
HADHAP40939 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.51■□□□□ 0.71
HADHAP40939 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HADHAP40939 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.51■□□□□ 0.71
HADHAP40939 AC004264.1-201ENST00000608354 794 ntBASIC19.51■□□□□ 0.71
HADHAP40939 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HADHAP40939 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.51■□□□□ 0.71
HADHAP40939 AC073648.6-201ENST00000641589 218 ntBASIC19.51■□□□□ 0.71
HADHAP40939 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HADHAP40939 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
HADHAP40939 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.51■□□□□ 0.71
HADHAP40939 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HADHAP40939 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HADHAP40939 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.51■□□□□ 0.71
HADHAP40939 KRT8P8-201ENST00000434750 1448 ntBASIC19.51■□□□□ 0.71
HADHAP40939 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.51■□□□□ 0.71
HADHAP40939 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
HADHAP40939 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HADHAP40939 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HADHAP40939 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HADHAP40939 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HADHAP40939 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HADHAP40939 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HADHAP40939 AC233263.1-201ENST00000578059 224 ntBASIC19.5■□□□□ 0.71
HADHAP40939 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.5■□□□□ 0.71
HADHAP40939 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HADHAP40939 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.5■□□□□ 0.71
HADHAP40939 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HADHAP40939 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
HADHAP40939 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HADHAP40939 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HADHAP40939 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HADHAP40939 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HADHAP40939 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HADHAP40939 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.49■□□□□ 0.71
HADHAP40939 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HADHAP40939 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.49■□□□□ 0.71
HADHAP40939 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HADHAP40939 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HADHAP40939 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.49■□□□□ 0.71
HADHAP40939 AC239809.2-201ENST00000415381 517 ntBASIC19.49■□□□□ 0.71
HADHAP40939 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.49■□□□□ 0.71
HADHAP40939 AC128676.1-201ENST00000454392 318 ntBASIC19.49■□□□□ 0.71
HADHAP40939 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.49■□□□□ 0.71
HADHAP40939 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HADHAP40939 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.49■□□□□ 0.71
HADHAP40939 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.49■□□□□ 0.71
HADHAP40939 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HADHAP40939 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.49■□□□□ 0.71
HADHAP40939 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
HADHAP40939 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
HADHAP40939 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HADHAP40939 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HADHAP40939 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HADHAP40939 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HADHAP40939 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.49■□□□□ 0.71
HADHAP40939 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HADHAP40939 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HADHAP40939 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HADHAP40939 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HADHAP40939 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HADHAP40939 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HADHAP40939 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HADHAP40939 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.48■□□□□ 0.71
HADHAP40939 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms