Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP8P40818 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP8P40818 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.99■□□□□ 0.95
USP8P40818 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
USP8P40818 AC098818.2-201ENST00000564925 2320 ntBASIC20.99■□□□□ 0.95
USP8P40818 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP8P40818 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP8P40818 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP8P40818 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP8P40818 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP8P40818 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP8P40818 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP8P40818 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.99■□□□□ 0.95
USP8P40818 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.99■□□□□ 0.95
USP8P40818 UNC93B5-201ENST00000530315 699 ntBASIC20.99■□□□□ 0.95
USP8P40818 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP8P40818 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP8P40818 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.99■□□□□ 0.95
USP8P40818 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
USP8P40818 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.99■□□□□ 0.95
USP8P40818 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP8P40818 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP8P40818 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP8P40818 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP8P40818 AP006587.1-201ENST00000534129 1502 ntBASIC20.99■□□□□ 0.95
USP8P40818 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP8P40818 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
USP8P40818 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP8P40818 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP8P40818 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP8P40818 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP8P40818 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP8P40818 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP8P40818 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
USP8P40818 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.98■□□□□ 0.95
USP8P40818 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
USP8P40818 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.98■□□□□ 0.95
USP8P40818 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.98■□□□□ 0.95
USP8P40818 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.98■□□□□ 0.95
USP8P40818 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP8P40818 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP8P40818 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
USP8P40818 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP8P40818 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
USP8P40818 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP8P40818 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP8P40818 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
USP8P40818 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP8P40818 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP8P40818 AC005332.7-201ENST00000614046 2005 ntBASIC20.97■□□□□ 0.95
USP8P40818 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP8P40818 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.97■□□□□ 0.95
USP8P40818 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
USP8P40818 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP8P40818 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.97■□□□□ 0.95
USP8P40818 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.97■□□□□ 0.95
USP8P40818 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
USP8P40818 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.97■□□□□ 0.95
USP8P40818 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.97■□□□□ 0.95
USP8P40818 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.97■□□□□ 0.95
USP8P40818 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
USP8P40818 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP8P40818 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP8P40818 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP8P40818 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.97■□□□□ 0.95
USP8P40818 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP8P40818 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP8P40818 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP8P40818 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP8P40818 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP8P40818 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
USP8P40818 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
USP8P40818 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP8P40818 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.96■□□□□ 0.95
USP8P40818 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP8P40818 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.96■□□□□ 0.95
USP8P40818 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.96■□□□□ 0.95
USP8P40818 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP8P40818 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP8P40818 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
USP8P40818 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP8P40818 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.96■□□□□ 0.95
USP8P40818 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.96■□□□□ 0.95
USP8P40818 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP8P40818 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.96■□□□□ 0.95
USP8P40818 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP8P40818 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP8P40818 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.95■□□□□ 0.94
USP8P40818 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
USP8P40818 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.95■□□□□ 0.94
USP8P40818 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.95■□□□□ 0.94
USP8P40818 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP8P40818 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP8P40818 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
USP8P40818 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.95■□□□□ 0.94
USP8P40818 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP8P40818 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP8P40818 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.95■□□□□ 0.94
USP8P40818 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP8P40818 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms