Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCK1P35558 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.3■□□□□ 0.84
PCK1P35558 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCK1P35558 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.3■□□□□ 0.84
PCK1P35558 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCK1P35558 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCK1P35558 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCK1P35558 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCK1P35558 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCK1P35558 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.29■□□□□ 0.84
PCK1P35558 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.29■□□□□ 0.84
PCK1P35558 TUBB8P6-201ENST00000436895 1288 ntBASIC20.29■□□□□ 0.84
PCK1P35558 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.29■□□□□ 0.84
PCK1P35558 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.29■□□□□ 0.84
PCK1P35558 PRKY-204ENST00000533551 1019 ntBASIC20.29■□□□□ 0.84
PCK1P35558 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.29■□□□□ 0.84
PCK1P35558 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.29■□□□□ 0.84
PCK1P35558 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCK1P35558 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PCK1P35558 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.29■□□□□ 0.84
PCK1P35558 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCK1P35558 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PCK1P35558 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCK1P35558 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCK1P35558 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCK1P35558 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCK1P35558 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCK1P35558 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCK1P35558 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.28■□□□□ 0.84
PCK1P35558 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCK1P35558 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCK1P35558 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCK1P35558 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
PCK1P35558 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PCK1P35558 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCK1P35558 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCK1P35558 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCK1P35558 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCK1P35558 KRT17P3-201ENST00000420566 1262 ntBASIC20.28■□□□□ 0.84
PCK1P35558 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.28■□□□□ 0.84
PCK1P35558 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCK1P35558 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCK1P35558 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PCK1P35558 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.28■□□□□ 0.84
PCK1P35558 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.28■□□□□ 0.84
PCK1P35558 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.28■□□□□ 0.84
PCK1P35558 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.28■□□□□ 0.84
PCK1P35558 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCK1P35558 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCK1P35558 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCK1P35558 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCK1P35558 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCK1P35558 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.28■□□□□ 0.84
PCK1P35558 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCK1P35558 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.28■□□□□ 0.84
PCK1P35558 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCK1P35558 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCK1P35558 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCK1P35558 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PCK1P35558 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.27■□□□□ 0.84
PCK1P35558 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PCK1P35558 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.27■□□□□ 0.84
PCK1P35558 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.27■□□□□ 0.84
PCK1P35558 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.27■□□□□ 0.84
PCK1P35558 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.27■□□□□ 0.84
PCK1P35558 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
PCK1P35558 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
PCK1P35558 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.27■□□□□ 0.84
PCK1P35558 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.27■□□□□ 0.84
PCK1P35558 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.27■□□□□ 0.84
PCK1P35558 MTDHP1-201ENST00000605323 784 ntBASIC20.27■□□□□ 0.84
PCK1P35558 AC069544.1-201ENST00000609399 999 ntBASIC20.27■□□□□ 0.84
PCK1P35558 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.27■□□□□ 0.84
PCK1P35558 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.27■□□□□ 0.84
PCK1P35558 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCK1P35558 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.27■□□□□ 0.84
PCK1P35558 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms