Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC124016.1-201ENST00000609552 612 ntBASIC20.34■□□□□ 0.85
RFC1P35251 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC1P35251 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RFC1P35251 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.34■□□□□ 0.85
RFC1P35251 SDHAP1-207ENST00000440850 2000 ntBASIC20.34■□□□□ 0.85
RFC1P35251 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFC1P35251 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.34■□□□□ 0.85
RFC1P35251 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFC1P35251 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFC1P35251 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFC1P35251 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
RFC1P35251 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFC1P35251 AC087289.5-201ENST00000586076 3175 ntBASIC20.33■□□□□ 0.85
RFC1P35251 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
RFC1P35251 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.33■□□□□ 0.85
RFC1P35251 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RFC1P35251 TSPY20P-201ENST00000450910 630 ntBASIC20.33■□□□□ 0.85
RFC1P35251 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.33■□□□□ 0.85
RFC1P35251 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RFC1P35251 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.33■□□□□ 0.85
RFC1P35251 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.33■□□□□ 0.85
RFC1P35251 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFC1P35251 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFC1P35251 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFC1P35251 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RFC1P35251 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.33■□□□□ 0.84
RFC1P35251 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFC1P35251 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.33■□□□□ 0.84
RFC1P35251 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.33■□□□□ 0.84
RFC1P35251 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
RFC1P35251 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RFC1P35251 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RFC1P35251 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC1P35251 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC1P35251 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.32■□□□□ 0.84
RFC1P35251 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RFC1P35251 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC1P35251 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.32■□□□□ 0.84
RFC1P35251 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RFC1P35251 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.32■□□□□ 0.84
RFC1P35251 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.32■□□□□ 0.84
RFC1P35251 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC1P35251 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC1P35251 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.32■□□□□ 0.84
RFC1P35251 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC1P35251 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC1P35251 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.32■□□□□ 0.84
RFC1P35251 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC1P35251 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.32■□□□□ 0.84
RFC1P35251 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.32■□□□□ 0.84
RFC1P35251 AC004264.1-201ENST00000608354 794 ntBASIC20.32■□□□□ 0.84
RFC1P35251 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RFC1P35251 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RFC1P35251 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC1P35251 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.32■□□□□ 0.84
RFC1P35251 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC1P35251 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.32■□□□□ 0.84
RFC1P35251 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.32■□□□□ 0.84
RFC1P35251 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.32■□□□□ 0.84
RFC1P35251 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC1P35251 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.32■□□□□ 0.84
RFC1P35251 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC1P35251 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC1P35251 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC1P35251 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC1P35251 LINC01465-201ENST00000408887 1940 ntBASIC20.31■□□□□ 0.84
RFC1P35251 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.31■□□□□ 0.84
RFC1P35251 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFC1P35251 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC1P35251 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.31■□□□□ 0.84
RFC1P35251 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.31■□□□□ 0.84
RFC1P35251 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.31■□□□□ 0.84
RFC1P35251 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC1P35251 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC1P35251 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.31■□□□□ 0.84
RFC1P35251 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.31■□□□□ 0.84
RFC1P35251 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RFC1P35251 AC133681.1-201ENST00000465482 601 ntBASIC20.31■□□□□ 0.84
RFC1P35251 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.31■□□□□ 0.84
RFC1P35251 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.31■□□□□ 0.84
RFC1P35251 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.31■□□□□ 0.84
RFC1P35251 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RFC1P35251 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.31■□□□□ 0.84
RFC1P35251 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFC1P35251 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC1P35251 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RFC1P35251 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFC1P35251 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC1P35251 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.3■□□□□ 0.84
RFC1P35251 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC1P35251 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.3■□□□□ 0.84
RFC1P35251 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC1P35251 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC1P35251 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC1P35251 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFC1P35251 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RFC1P35251 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC1P35251 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC1P35251 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RFC1P35251 C1QL1P1-201ENST00000568105 661 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms