Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A4P31645 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SLC6A4P31645 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC6A4P31645 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC6A4P31645 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A4P31645 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.86■□□□□ 0.77
SLC6A4P31645 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC6A4P31645 AP005242.2-201ENST00000580065 1175 ntBASIC19.86■□□□□ 0.77
SLC6A4P31645 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.86■□□□□ 0.77
SLC6A4P31645 LINC01023-201ENST00000606054 436 ntBASIC19.86■□□□□ 0.77
SLC6A4P31645 AC010947.1-201ENST00000623454 693 ntBASIC19.86■□□□□ 0.77
SLC6A4P31645 AC097493.4-201ENST00000641197 219 ntBASIC19.86■□□□□ 0.77
SLC6A4P31645 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SLC6A4P31645 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A4P31645 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A4P31645 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A4P31645 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A4P31645 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC6A4P31645 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A4P31645 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A4P31645 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SLC6A4P31645 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A4P31645 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A4P31645 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.85■□□□□ 0.77
SLC6A4P31645 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.85■□□□□ 0.77
SLC6A4P31645 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SLC6A4P31645 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.85■□□□□ 0.77
SLC6A4P31645 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.85■□□□□ 0.77
SLC6A4P31645 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A4P31645 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SLC6A4P31645 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A4P31645 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A4P31645 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC6A4P31645 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A4P31645 AC096733.2-201ENST00000609937 1394 ntBASIC19.84■□□□□ 0.77
SLC6A4P31645 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A4P31645 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A4P31645 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A4P31645 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC6A4P31645 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SLC6A4P31645 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC6A4P31645 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.84■□□□□ 0.77
SLC6A4P31645 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.84■□□□□ 0.77
SLC6A4P31645 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
SLC6A4P31645 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.84■□□□□ 0.77
SLC6A4P31645 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC6A4P31645 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A4P31645 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A4P31645 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A4P31645 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A4P31645 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A4P31645 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC6A4P31645 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.84■□□□□ 0.77
SLC6A4P31645 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SLC6A4P31645 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.84■□□□□ 0.77
SLC6A4P31645 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC6A4P31645 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC6A4P31645 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC6A4P31645 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.83■□□□□ 0.77
SLC6A4P31645 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.83■□□□□ 0.77
SLC6A4P31645 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC6A4P31645 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC6A4P31645 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC6A4P31645 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.83■□□□□ 0.77
SLC6A4P31645 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC6A4P31645 MFAP1P1-201ENST00000442257 1255 ntBASIC19.83■□□□□ 0.77
SLC6A4P31645 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC6A4P31645 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.83■□□□□ 0.77
SLC6A4P31645 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.83■□□□□ 0.77
SLC6A4P31645 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.83■□□□□ 0.77
SLC6A4P31645 NAPSB-206ENST00000562112 1266 ntBASIC19.83■□□□□ 0.77
SLC6A4P31645 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
SLC6A4P31645 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SLC6A4P31645 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SLC6A4P31645 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
SLC6A4P31645 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SLC6A4P31645 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.83■□□□□ 0.76
SLC6A4P31645 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.83■□□□□ 0.76
SLC6A4P31645 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC6A4P31645 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A4P31645 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A4P31645 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC6A4P31645 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SLC6A4P31645 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A4P31645 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A4P31645 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A4P31645 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A4P31645 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A4P31645 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
SLC6A4P31645 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
SLC6A4P31645 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
SLC6A4P31645 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC6A4P31645 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC6A4P31645 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.82■□□□□ 0.76
SLC6A4P31645 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC6A4P31645 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC6A4P31645 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC6A4P31645 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.82■□□□□ 0.76
SLC6A4P31645 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC6A4P31645 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms