Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN6P29350 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN6P29350 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PTPN6P29350 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN6P29350 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN6P29350 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN6P29350 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN6P29350 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.32■□□□□ 0.52
PTPN6P29350 ITM2C-210ENST00000620962 501 ntBASIC18.32■□□□□ 0.52
PTPN6P29350 TMEM191A-211ENST00000637163 1067 ntBASIC18.32■□□□□ 0.52
PTPN6P29350 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN6P29350 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN6P29350 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN6P29350 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN6P29350 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN6P29350 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN6P29350 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN6P29350 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN6P29350 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PTPN6P29350 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN6P29350 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN6P29350 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN6P29350 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN6P29350 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN6P29350 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN6P29350 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN6P29350 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN6P29350 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN6P29350 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PTPN6P29350 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN6P29350 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.31■□□□□ 0.52
PTPN6P29350 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.31■□□□□ 0.52
PTPN6P29350 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PTPN6P29350 AC104417.2-201ENST00000562989 1793 ntBASIC18.31■□□□□ 0.52
PTPN6P29350 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN6P29350 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN6P29350 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN6P29350 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PTPN6P29350 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN6P29350 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PTPN6P29350 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PTPN6P29350 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN6P29350 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN6P29350 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PTPN6P29350 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN6P29350 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN6P29350 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN6P29350 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
PTPN6P29350 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN6P29350 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PTPN6P29350 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN6P29350 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN6P29350 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PTPN6P29350 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN6P29350 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.3■□□□□ 0.52
PTPN6P29350 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN6P29350 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.3■□□□□ 0.52
PTPN6P29350 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.3■□□□□ 0.52
PTPN6P29350 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN6P29350 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN6P29350 SDHAP1-207ENST00000440850 2000 ntBASIC18.3■□□□□ 0.52
PTPN6P29350 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN6P29350 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN6P29350 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
PTPN6P29350 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPN6P29350 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN6P29350 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPN6P29350 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
PTPN6P29350 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.29■□□□□ 0.52
PTPN6P29350 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN6P29350 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN6P29350 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN6P29350 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN6P29350 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN6P29350 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN6P29350 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN6P29350 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.29■□□□□ 0.52
PTPN6P29350 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN6P29350 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN6P29350 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN6P29350 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN6P29350 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN6P29350 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.29■□□□□ 0.52
PTPN6P29350 KRT18P29-201ENST00000397031 1267 ntBASIC18.29■□□□□ 0.52
PTPN6P29350 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN6P29350 AL390719.1-204ENST00000412397 1219 ntBASIC18.29■□□□□ 0.52
PTPN6P29350 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN6P29350 AC006058.3-201ENST00000606217 1069 ntBASIC18.29■□□□□ 0.52
PTPN6P29350 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN6P29350 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.29■□□□□ 0.52
PTPN6P29350 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.29■□□□□ 0.52
PTPN6P29350 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN6P29350 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTPN6P29350 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTPN6P29350 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.28■□□□□ 0.52
PTPN6P29350 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
PTPN6P29350 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.28■□□□□ 0.52
PTPN6P29350 FP475955.4-201ENST00000623131 1990 ntBASIC18.28■□□□□ 0.52
PTPN6P29350 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.28■□□□□ 0.52
PTPN6P29350 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms