Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.79■□□□□ 0.6
EPHA3P29320 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.79■□□□□ 0.6
EPHA3P29320 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA3P29320 FP475955.4-201ENST00000623131 1990 ntBASIC18.79■□□□□ 0.6
EPHA3P29320 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
EPHA3P29320 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.79■□□□□ 0.6
EPHA3P29320 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
EPHA3P29320 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.79■□□□□ 0.6
EPHA3P29320 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
EPHA3P29320 KRT18P5-201ENST00000436075 1291 ntBASIC18.79■□□□□ 0.6
EPHA3P29320 AC093787.1-201ENST00000450396 207 ntBASIC18.79■□□□□ 0.6
EPHA3P29320 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.79■□□□□ 0.6
EPHA3P29320 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.79■□□□□ 0.6
EPHA3P29320 OR10C1-204ENST00000622521 1039 ntBASIC18.79■□□□□ 0.6
EPHA3P29320 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA3P29320 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA3P29320 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA3P29320 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA3P29320 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA3P29320 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA3P29320 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA3P29320 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
EPHA3P29320 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.79■□□□□ 0.6
EPHA3P29320 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EPHA3P29320 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.79■□□□□ 0.6
EPHA3P29320 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
EPHA3P29320 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHA3P29320 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHA3P29320 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHA3P29320 AL031598.1-201ENST00000561511 1773 ntBASIC18.78■□□□□ 0.6
EPHA3P29320 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.78■□□□□ 0.6
EPHA3P29320 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHA3P29320 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHA3P29320 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHA3P29320 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHA3P29320 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHA3P29320 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHA3P29320 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.78■□□□□ 0.6
EPHA3P29320 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.78■□□□□ 0.6
EPHA3P29320 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.78■□□□□ 0.6
EPHA3P29320 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.78■□□□□ 0.6
EPHA3P29320 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHA3P29320 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EPHA3P29320 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHA3P29320 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.78■□□□□ 0.6
EPHA3P29320 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
EPHA3P29320 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EPHA3P29320 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EPHA3P29320 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.77■□□□□ 0.6
EPHA3P29320 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EPHA3P29320 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
EPHA3P29320 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
EPHA3P29320 AC135050.7-201ENST00000624508 2218 ntBASIC18.77■□□□□ 0.6
EPHA3P29320 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EPHA3P29320 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
EPHA3P29320 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EPHA3P29320 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EPHA3P29320 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.77■□□□□ 0.6
EPHA3P29320 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.77■□□□□ 0.6
EPHA3P29320 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.77■□□□□ 0.6
EPHA3P29320 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
EPHA3P29320 AC007322.1-201ENST00000426983 750 ntBASIC18.77■□□□□ 0.6
EPHA3P29320 AC006015.1-201ENST00000429970 570 ntBASIC18.77■□□□□ 0.6
EPHA3P29320 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EPHA3P29320 MIR6821-201ENST00000617625 74 ntBASIC18.77■□□□□ 0.6
EPHA3P29320 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
EPHA3P29320 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
EPHA3P29320 AL390961.4-201ENST00000623958 2535 ntBASIC18.77■□□□□ 0.6
EPHA3P29320 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EPHA3P29320 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EPHA3P29320 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
EPHA3P29320 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.77■□□□□ 0.59
EPHA3P29320 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
EPHA3P29320 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
EPHA3P29320 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
EPHA3P29320 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
EPHA3P29320 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
EPHA3P29320 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.76■□□□□ 0.59
EPHA3P29320 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.76■□□□□ 0.59
EPHA3P29320 SDHAP1-207ENST00000440850 2000 ntBASIC18.76■□□□□ 0.59
EPHA3P29320 AC090164.3-201ENST00000610780 2143 ntBASIC18.76■□□□□ 0.59
EPHA3P29320 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
EPHA3P29320 GPX1P1-201ENST00000388829 606 ntBASIC18.76■□□□□ 0.59
EPHA3P29320 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EPHA3P29320 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.76■□□□□ 0.59
EPHA3P29320 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.76■□□□□ 0.59
EPHA3P29320 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EPHA3P29320 AC231657.2-201ENST00000624556 255 ntBASIC18.76■□□□□ 0.59
EPHA3P29320 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EPHA3P29320 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
EPHA3P29320 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
EPHA3P29320 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.76■□□□□ 0.59
EPHA3P29320 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EPHA3P29320 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.76■□□□□ 0.59
EPHA3P29320 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.76■□□□□ 0.59
EPHA3P29320 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
EPHA3P29320 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
EPHA3P29320 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPHA3P29320 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EPHA3P29320 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms