Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CHMP24386 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.03■□□□□ 0.48
CHMP24386 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP24386 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP24386 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CHMP24386 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP24386 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.03■□□□□ 0.48
CHMP24386 AC142381.4-202ENST00000563973 229 ntBASIC18.03■□□□□ 0.48
CHMP24386 RN7SL471P-201ENST00000580476 299 ntBASIC18.03■□□□□ 0.48
CHMP24386 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CHMP24386 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CHMP24386 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
CHMP24386 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.03■□□□□ 0.48
CHMP24386 AC066615.1-201ENST00000640911 628 ntBASIC18.03■□□□□ 0.48
CHMP24386 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.03■□□□□ 0.48
CHMP24386 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP24386 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.03■□□□□ 0.48
CHMP24386 NEFHP1-201ENST00000412845 2629 ntBASIC18.02■□□□□ 0.48
CHMP24386 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
CHMP24386 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP24386 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CHMP24386 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP24386 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CHMP24386 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP24386 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
CHMP24386 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CHMP24386 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP24386 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CHMP24386 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP24386 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.02■□□□□ 0.48
CHMP24386 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CHMP24386 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP24386 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHMP24386 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHMP24386 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHMP24386 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CHMP24386 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CHMP24386 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 AP001271.2-201ENST00000624018 1556 ntBASIC18.01■□□□□ 0.47
CHMP24386 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CHMP24386 KRT16P6-202ENST00000425692 1426 ntBASIC18.01■□□□□ 0.47
CHMP24386 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CHMP24386 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.01■□□□□ 0.47
CHMP24386 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.01■□□□□ 0.47
CHMP24386 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.01■□□□□ 0.47
CHMP24386 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 AC098590.1-201ENST00000468126 897 ntBASIC18.01■□□□□ 0.47
CHMP24386 RPS2P52-201ENST00000469610 820 ntBASIC18.01■□□□□ 0.47
CHMP24386 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.01■□□□□ 0.47
CHMP24386 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.01■□□□□ 0.47
CHMP24386 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.01■□□□□ 0.47
CHMP24386 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP24386 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.01■□□□□ 0.47
CHMP24386 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CHMP24386 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18■□□□□ 0.47
CHMP24386 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CHMP24386 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18■□□□□ 0.47
CHMP24386 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CHMP24386 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CHMP24386 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18■□□□□ 0.47
CHMP24386 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CHMP24386 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18■□□□□ 0.47
CHMP24386 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP24386 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CHMP24386 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18■□□□□ 0.47
CHMP24386 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18■□□□□ 0.47
CHMP24386 AC233263.1-201ENST00000578059 224 ntBASIC18■□□□□ 0.47
CHMP24386 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CHMP24386 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18■□□□□ 0.47
CHMP24386 MTDHP1-201ENST00000605323 784 ntBASIC18■□□□□ 0.47
CHMP24386 AL121829.2-201ENST00000620908 328 ntBASIC18■□□□□ 0.47
CHMP24386 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms