Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AL031598.1-201ENST00000561511 1773 ntBASIC16.64■□□□□ 0.25
CCL1P22362 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL1P22362 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL1P22362 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CCL1P22362 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL1P22362 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL1P22362 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL1P22362 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL1P22362 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL1P22362 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL1P22362 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL1P22362 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL1P22362 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCL1P22362 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL1P22362 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CCL1P22362 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL1P22362 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL1P22362 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CCL1P22362 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL1P22362 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.63■□□□□ 0.25
CCL1P22362 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.63■□□□□ 0.25
CCL1P22362 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL1P22362 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL1P22362 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL1P22362 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL1P22362 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CCL1P22362 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL1P22362 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL1P22362 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL1P22362 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL1P22362 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCL1P22362 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCL1P22362 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL1P22362 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL1P22362 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL1P22362 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL1P22362 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL1P22362 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL1P22362 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL1P22362 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL1P22362 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCL1P22362 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCL1P22362 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL1P22362 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.62■□□□□ 0.25
CCL1P22362 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL1P22362 POM121L13P-201ENST00000422362 380 ntBASIC16.62■□□□□ 0.25
CCL1P22362 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL1P22362 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL1P22362 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.62■□□□□ 0.25
CCL1P22362 AC104771.1-201ENST00000603335 964 ntBASIC16.62■□□□□ 0.25
CCL1P22362 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.62■□□□□ 0.25
CCL1P22362 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL1P22362 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL1P22362 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL1P22362 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCL1P22362 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCL1P22362 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CCL1P22362 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL1P22362 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CCL1P22362 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL1P22362 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL1P22362 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL1P22362 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCL1P22362 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CCL1P22362 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL1P22362 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL1P22362 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL1P22362 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.61■□□□□ 0.25
CCL1P22362 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL1P22362 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCL1P22362 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CCL1P22362 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCL1P22362 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL1P22362 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL1P22362 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CCL1P22362 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCL1P22362 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.61■□□□□ 0.25
CCL1P22362 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL1P22362 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.61■□□□□ 0.25
CCL1P22362 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL1P22362 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.61■□□□□ 0.25
CCL1P22362 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCL1P22362 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCL1P22362 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL1P22362 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL1P22362 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL1P22362 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL1P22362 Z98044.1-201ENST00000632503 1764 ntBASIC16.61■□□□□ 0.25
CCL1P22362 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCL1P22362 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCL1P22362 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL1P22362 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL1P22362 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL1P22362 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.6■□□□□ 0.25
CCL1P22362 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.6■□□□□ 0.25
CCL1P22362 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.6■□□□□ 0.25
CCL1P22362 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCL1P22362 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.6■□□□□ 0.25
CCL1P22362 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CCL1P22362 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms